Miyakogusa Predicted Gene

Lj4g3v0666960.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0666960.1 Non Chatacterized Hit- tr|A2Q297|A2Q297_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,87,0,Cullin
repeat-like,Cullin repeat-like-containing domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,,CUFF.47827.1
         (2331 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS344542 similar to UniRef100_Q940L2 Cluster: At1g10180...   315   7e-85

>gnl|LJGI|FS344542 similar to UniRef100_Q940L2 Cluster: At1g10180/F14N23_6; n=1;
           Arabidopsis thaliana|Rep: At1g10180/F14N23_6 -
           Arabidopsis thaliana (Mouse-ear cress), partial (7%)
          Length = 163

 Score =  315 bits (159), Expect = 7e-85
 Identities = 162/163 (99%)
 Strand = Plus / Plus

                                                                       
Query: 25  gatttcccttccattgagagcataatcccccaatccaaggttgactcactctaccagtct 84
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gatttcccttccattgagagcataatcccccaatccaaggttgactcactctaccagtct 60

                                                                       
Query: 85  aaaaccgaacaggggattagaaagctttgctgtgagctcttagatttgaaggatgctgtg 144
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61  aaaaccgaacaggggattagaaagctttgctgtgagctcttaaatttgaaggatgctgtg 120

                                                      
Query: 145 gagaacttaagtggcaatatgcactcaaaattcttagctttct 187
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagaacttaagtggcaatatgcactcaaaattcttagctttct 163