Miyakogusa Predicted Gene

Lj4g3v0655900.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0655900.1 Non Chatacterized Hit- tr|I0YVT9|I0YVT9_9CHLO
Uncharacterized protein (Fragment) OS=Coccomyxa subell,46,1e-17,no
description,Cytochrome c domain; Cytochrome c,Cytochrome c domain;
CYTC,Cytochrome c domain; seg,,CUFF.47821.1
         (528 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65617 similar to UniRef100_A2Q293 Cluster: Cytochrome...  1031   0.0  

>gnl|LJGI|TC65617 similar to UniRef100_A2Q293 Cluster: Cytochrome c, monohaem; n=1;
           Medicago truncatula|Rep: Cytochrome c, monohaem -
           Medicago truncatula (Barrel medic), partial (82%)
          Length = 681

 Score = 1031 bits (520), Expect = 0.0
 Identities = 526/528 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagcttgctggcatgatttcttgttccacctattacaatcgccttctatccgttaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  atgaagcttgctggcatgatttcttgttccacctattacaatcgccttctatccgttaag 114

                                                                       
Query: 61  gatagtgtgaaaagggaagaagagaaccccattccaagaagaaaggcaaaagaactcaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 gatagtgtgaaaagggaagaagagaaccccattccaagaagaaaggcaaaagaactcaag 174

                                                                       
Query: 121 ttttctttgaagagcttggctcctcctcttgtggctgcgtttctggtcttatctccaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ttttctttgaagagcttggctcctcctcttgtggctgcgtttctggtcttatctccaatt 234

                                                                       
Query: 181 tctggcactccagtttcaagtggccaaaccatagacatccagagaggagccacattgttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tctggcactccagtttcaagtggccaaaccatagacatccagagaggagccacattgttt 294

                                                                       
Query: 241 cgtaaagcttgtatcggatgtcacgatgctggtggaaacataatacaaccaggatcaact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cgtaaagcttgtatcggatgtcacgatgctggtggaaacataatacaaccaggatcaact 354

                                                                       
Query: 301 ctatacacaaaggatttacagagaaatggagttgatacagaagaagcgatttaccgtatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctatacacaaaggatttacagagaaatggagttgatacagaagaagcgatttaccgtatc 414

                                                                       
Query: 361 tcatactatggcaaagaaagaatgccgggctttggtaaagagtgcatgcctcggggccag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tcatactatggcaaagaaagaatgccgggctttggtaaagagtgcatgcctcggggccag 474

                                                                       
Query: 421 tgcacatttggagctcgtttggaagatgaagatattaagttattggccgagtttgtcaag 480
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 475 tgcacatttggagctcgtttggaagatgaagatattaagttatcggccgagtttgtcaag 534

                                                           
Query: 481 ttacaggccaataaagggtggccaagtatagaattgcaagaaaaatga 528
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctacaggccaataaagggtggccaagtatagaattgcaagaaaaatga 582