Miyakogusa Predicted Gene
- Lj4g3v0654660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0654660.1 Non Chatacterized Hit- tr|B8A6M6|B8A6M6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,47.89,0.0000000000001,helix loop helix domain,Helix-loop-helix
domain; EGL3 (ENHANCER OF GLABRA3), DNA BINDING /
TRANSCRIP,gene.g53098.t1.1
(1152 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011534 similar to UniRef100_A7QN80 Cluster: Chromosom... 1176 0.0
gnl|LJGI|GO038216 similar to UniRef100_A7QN80 Cluster: Chromosom... 1158 0.0
gnl|LJGI|BP038089 similar to UniRef100_A7QN80 Cluster: Chromosom... 418 e-116
gnl|LJGI|TC79271 similar to UniRef100_A7QN80 Cluster: Chromosome... 274 1e-72
gnl|LJGI|BP036451 similar to UniRef100_A7QN80 Cluster: Chromosom... 224 1e-57
>gnl|LJGI|GO011534 similar to UniRef100_A7QN80 Cluster: Chromosome undetermined
scaffold_131, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_131, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(38%)
Length = 763
Score = 1176 bits (593), Expect = 0.0
Identities = 729/768 (94%), Gaps = 6/768 (0%)
Strand = Plus / Plus
Query: 276 atctttactcactaatccacccaacatttgtatctcaaacccaactcagaggacacccaa 335
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2 atctttactcaccaatccacccaacatttgcatctcaaacccaactcagaggacacccaa 61
Query: 336 tttccagaactcaatgacctttctaggagaacttccaatgggaccagacaacacaagtgc 395
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 62 tttccagaactcaatgacctttctaggagaccttccaatgggaccagacaacacaagtgc 121
Query: 396 ctcctcagttctatatgatcctctatttcatttgaacctgcctccacagcctccagccct 455
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atcctcagttctgtatgatcctctatttcatttgaacctgcctccacagcctccagccct 181
Query: 456 cagagagctgttccaatctctcccccgaggctacaggttgccaaccagctccagggacga 515
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 182 cagagagctgttccaatctctcccccgtggctacaggttgccaaccagctctagggacga 241
Query: 516 ttcacttttcggtggaggcgatgagatggagggagatgggagtcagcttgacatgggagt 575
||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 242 ttcgcttttcggtggaggggatgagatggagggagatgggagccagcttgacatgggagt 301
Query: 576 gctggaattcaataggggcacaacttctgttggcaaaggaagggaaggaaaaggtgccaa 635
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctggatttcaataggggcacagcttctgttggcaaaggaagggaaggaaaaggtgccaa 361
Query: 636 accttttgcaactgagaaagacagaagagagcagctgaatggaaaatacaaaatcttgag 695
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 362 accttttgcaactgagaaagacagaagagagcaattgaatggaaaatacaaaatctttag 421
Query: 696 gagtcttatccctagccccaccaagcctgatagagcctctgtggtgggtgatgccattga 755
|||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 422 gagtcttatccctaaccccaccaagcctgatagagcctctgttgttggtgatgccattga 481
Query: 756 ttatataaaagagctgattagaacagtcaatgagctcaaattattggtggagaagaaaag 815
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 482 gtatataagagagctgattagaacagtcaatgagctcaaactattggtggagaagaaaag 541
Query: 816 acatgagagggagaggtgcaagaggccaaaaaatgaagaggatgctgaggaaagctgtaa 875
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 542 acatgagagggagaggtgcaagaggccaaaaaacgaagaggatgctgaggaaagctgtaa 601
Query: 876 catcaagccttttggtgatccagatgggtacataaggacctcatggctacagaggaaatc 935
||| ||||||||||| ||||||||||| ||||||| |||||||||||| |||||||||||
Sbjct: 602 cattaagccttttggggatccagatggatacataaagacctcatggctccagaggaaatc 661
Query: 936 caaagagagtgaggtcgatgtccggatcatcgacgatgatgtcacaattaaattctttca 995
|||||| |||||||| |||||||| |||||||| |||||||||||||| |||||| ||||
Sbjct: 662 caaagacagtgaggt-gatgtccgaatcatcgatgatgatgtcacaatcaaattc-ttca 719
Query: 996 gaggaagaagattaactgcctgctgtttgtgtcaaaggttctggatga 1043
||||| ||||| |||||||||| ||||||||||| |||||||||||
Sbjct: 720 gagga--gagatt-actgcctgctatttgtgtcaaa-gttctggatga 763
>gnl|LJGI|GO038216 similar to UniRef100_A7QN80 Cluster: Chromosome undetermined
scaffold_131, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_131,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 806
Score = 1158 bits (584), Expect = 0.0
Identities = 687/720 (95%), Gaps = 6/720 (0%)
Strand = Plus / Plus
Query: 1 atggttccagagaacaccacaaacaacaacaacaatatcatggataaccatttggtgaaa 60
|||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 31 atggttacagagaacaccacaaacagcaacaaca---tcatggataaccatttggtgcaa 87
Query: 61 gaggtcattgatgcctctccctatcagcaatccacctgggaccctaatgttcaagaatta 120
||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 88 gaggtcattgatgcccctctctatcagcaatccacttgggaccctaatgttcaagaagta 147
Query: 121 caagatatgagctatgccaaccaccaagaacaacaatttcagcatattgatgcacaaaac 180
||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 148 caagatatgagctatgctaaccatccagaacaacaatttcagcatattgatgcacaaaac 207
Query: 181 tactgccaaagctacaacccttcttccatactggacccttcttacccttcaccagatctc 240
|||||||||||||||| || |||||||||| |||||||||||||||||||||||||||
Sbjct: 208 tactgccaaagctaca---ctccttccatactagacccttcttacccttcaccagatctc 264
Query: 241 ctaaactttctccacttgcccacatgctcagcttcatctttactcactaatccacccaac 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 ctaaactttctccacttgcccacatgctcagcttcatctttactcaccaatccacccaac 324
Query: 301 atttgtatctcaaacccaactcagaggacacccaatttccagaactcaatgacctttcta 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttgcatctcaaacccaactcagaggacacccaatttccagaactcaatgacctttcta 384
Query: 361 ggagaacttccaatgggaccagacaacacaagtgcctcctcagttctatatgatcctcta 420
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 385 ggagaccttccaatgggaccagacaacacaagtgcatcctcagttctgtatgatcctcta 444
Query: 421 tttcatttgaacctgcctccacagcctccagccctcagagagctgttccaatctctcccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttcatttgaacctgcctccacagcctccagccctcagagagctgttccaatctctcccc 504
Query: 481 cgaggctacaggttgccaaccagctccagggacgattcacttttcggtggaggcgatgag 540
|| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 505 cgtggctacaggttgccaaccagctccagggacgattcgcttttcggtggaggggatgag 564
Query: 541 atggagggagatgggagtcagcttgacatgggagtgctggaattcaataggggcacaact 600
||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| ||
Sbjct: 565 atggagggagatgggagccagcttgacatgggagtgctggatttcaatagggacacagct 624
Query: 601 tctgttggcaaaggaagggaaggaaaaggtgccaaaccttttgcaactgagaaagacaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctgttggcaaaggaagggaaggaaaaggtgccaaaccttttgcaactgagaaagacaga 684
Query: 661 agagagcagctgaatggaaaatacaaaatcttgaggagtcttatccctagccccaccaag 720
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 agagagcaattgaatggaaaatacaaaatcttgaggagtcttatccctaaccccaccaag 744
>gnl|LJGI|BP038089 similar to UniRef100_A7QN80 Cluster: Chromosome undetermined
scaffold_131, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_131, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(21%)
Length = 526
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Minus
Query: 906 cataaggacctcatggctacagaggaaatccaaagagagtgaggtcgatgtccggatcat 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cataaggacctcatggctacagaggaaatccaaagagagtgaggtcgatgtccggatcat 467
Query: 966 cgacgatgatgtcacaattaaattctttcagaggaagaagattaactgcctgctgtttgt 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cgacgatgatgtcacaattaaattctttcagaggaagaagattaactgcctgctgtttgt 407
Query: 1026 gtcaaaggttctggatgaacttcaattggaacttcaccatcttgcaggtggacatgttgg 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtcaaaggttctggatgaacttcaattggaacttcaccatcttgcaggtggacatgttgg 347
Query: 1086 tgaatattggagtttcttgttcaatagcaag 1116
|||||||||||||||||||||||||||||||
Sbjct: 346 tgaatattggagtttcttgttcaatagcaag 316
>gnl|LJGI|TC79271 similar to UniRef100_A7QN80 Cluster: Chromosome undetermined
scaffold_131, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_131, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(21%)
Length = 544
Score = 274 bits (138), Expect = 1e-72
Identities = 219/246 (89%)
Strand = Plus / Plus
Query: 868 agctgtaacatcaagccttttggtgatccagatgggtacataaggacctcatggctacag 927
||||||||||| |||||||||||||||||||||||| | || |||||||||||||| |||
Sbjct: 5 agctgtaacataaagccttttggtgatccagatgggcatattaggacctcatggctccag 64
Query: 928 aggaaatccaaagagagtgaggtcgatgtccggatcatcgacgatgatgtcacaattaaa 987
|||||||| ||||| || ||||| ||||||||||| ||||| || ||||| ||||| |||
Sbjct: 65 aggaaatcgaaagatagcgaggttgatgtccggattatcgatgacgatgttacaatcaaa 124
Query: 988 ttctttcagaggaagaagattaactgcctgctgtttgtgtcaaaggttctggatgaactt 1047
||| |||||||||||||||||||||||| ||||||| || |||||||||||||| |||
Sbjct: 125 ctctctcagaggaagaagattaactgccttctgtttgcctccaaggttctggatgagctt 184
Query: 1048 caattggaacttcaccatcttgcaggtggacatgttggtgaatattggagtttcttgttc 1107
|| |||||| |||| ||| |||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 185 cagttggaaattcatcatgttgcaggtggacatgttggtgaatattgcagtttcttgctc 244
Query: 1108 aatagc 1113
||||||
Sbjct: 245 aatagc 250
>gnl|LJGI|BP036451 similar to UniRef100_A7QN80 Cluster: Chromosome undetermined
scaffold_131, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_131,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 496
Score = 224 bits (113), Expect = 1e-57
Identities = 388/482 (80%), Gaps = 36/482 (7%)
Strand = Plus / Plus
Query: 355 tttctaggagaacttccaatgggaccagacaacacaagtgcc---tcctcagttctatat 411
||||||||||| |||||||| ||| |||||||||||||||| ||||||||| | |
Sbjct: 20 tttctaggagaccttccaataggatcagacaacacaagtgctgcatcctcagtttngtgt 79
Query: 412 gatcctctatttcatttgaacc---tgcctccacagcctccagccctcagagagctgttc 468
|||||| | ||||||||||||| | ||||||| ||| | ||| | ||||||||||||
Sbjct: 80 gatcctttgtttcatttgaaccaagttcctccaccacctactgcctttagagagctgttc 139
Query: 469 caatctctcccccgaggctacaggttgccaaccagctccagggacgattcacttttcggt 528
|| ||||||||||| |||||||| || || | |||||| | ||| || |||||||
Sbjct: 140 cagtctctcccccgcggctacagctttccgatgagctcccagaacggctctattttcggc 199
Query: 529 ggag---gcgatgagatggagggagatgggagt---cagcttgacatgggagtgctggaa 582
|||| |||||||||| || |||||||| || |||||||||||||| |||||||||
Sbjct: 200 ggagaaggcgatgagatagatggagatggtggtagccagcttgacatgggggtgctggaa 259
Query: 583 ttcaata---------ggggcacaacttctgttggcaaaggaagggaaggaaaaggtgcc 633
||||||| ||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 260 ttcaatactatcaatagggtcacagcttctgttggcaaaggaagggaaggaaaaggt--- 316
Query: 634 aaaccttttgcaactgagaaagacagaagagagcagctgaatggaaaatacaaaatcttg 693
||||||||||| ||||||||||| |||||||||||||||| ||||||
Sbjct: 317 ------------actgagaaagaaagaagagagcaattgaatggaaaatacaagatcttg 364
Query: 694 aggagtcttatccctagccccaccaagcctgatagagcctctgtggtgggtgatgccatt 753
|||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||| |||
Sbjct: 365 aggagtcttatcccaagccccaccaagattgatagagcatctgtggtgggagatgctatt 424
Query: 754 gattatataaaagagctgattagaacagtcaatgagctcaaattattggtggagaagaaa 813
|| || |||| || |||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 425 gactacataagggaactgattagaacactgaatgagctcaagatattggtggagaagaaa 484
Query: 814 ag 815
||
Sbjct: 485 ag 486