Miyakogusa Predicted Gene

Lj4g3v0654650.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0654650.1 tr|A1SP67|A1SP67_NOCSJ Amino acid/amide ABC
transporter substrate-binding protein, HAAT family
(Prec,32.61,1.9,seg,NULL,CUFF.47810.1
         (270 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63635 similar to UniRef100_A7NZ31 Cluster: Chromosome...   412   e-115
gnl|LJGI|FS342555 weakly similar to UniRef100_A7QUD4 Cluster: Ch...    62   2e-09
gnl|LJGI|TC59249                                                       52   2e-06

>gnl|LJGI|TC63635 similar to UniRef100_A7NZ31 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (85%)
          Length = 688

 Score =  412 bits (208), Expect = e-115
 Identities = 208/208 (100%)
 Strand = Plus / Plus

                                                                       
Query: 63  agttccaaatggtctcacccttttgacgactccacccaggtgtctccgccggctccacct 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   agttccaaatggtctcacccttttgacgactccacccaggtgtctccgccggctccacct 62

                                                                       
Query: 123 ccatcaacctccgacgaaggccaccgaattcgagtcacttccattctctcacctttgtgt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  ccatcaacctccgacgaaggccaccgaattcgagtcacttccattctctcacctttgtgt 122

                                                                       
Query: 183 tctccacattctcactgtggtttccgacgccggatcgttcgattcggataatggggcgga 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tctccacattctcactgtggtttccgacgccggatcgttcgattcggataatggggcgga 182

                                       
Query: 243 aagctggcgggctttatatcaaccctaa 270
           ||||||||||||||||||||||||||||
Sbjct: 183 aagctggcgggctttatatcaaccctaa 210


>gnl|LJGI|FS342555 weakly similar to UniRef100_A7QUD4 Cluster: Chromosome chr11
           scaffold_177, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_177, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (33%)
          Length = 766

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 162 tccattctctcacctttgtgttctccacattctcactgt 200
           ||||||||||||||||||| |||||||||||| ||||||
Sbjct: 111 tccattctctcacctttgtattctccacattcacactgt 149



 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 133 ccgacgaaggccaccgaattcgagtcacttcc 164
           ||||||| ||||||||||||||||||||||||
Sbjct: 59  ccgacgacggccaccgaattcgagtcacttcc 90


>gnl|LJGI|TC59249 
          Length = 858

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 109 cgccggctccacctccatcaacctcc 134
           ||||||||||||||||||||||||||
Sbjct: 214 cgccggctccacctccatcaacctcc 239