Miyakogusa Predicted Gene

Lj4g3v0654420.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0654420.2 tr|G7JJX9|G7JJX9_MEDTR RuBisCO large
subunit-binding protein subunit alpha OS=Medicago truncatula
GN,83.99,0,GroEL apical domain-like,NULL; GroEL equatorial
domain-like,Chaperonin Cpn60/TCP-1; GroEL-intermedia,CUFF.47793.2
         (1770 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80482 homologue to UniRef100_Q2MGR4 Cluster: GroEL-li...   575   e-163

>gnl|LJGI|TC80482 homologue to UniRef100_Q2MGR4 Cluster: GroEL-like chaperone, ATPase;
            n=1; Medicago truncatula|Rep: GroEL-like chaperone,
            ATPase - Medicago truncatula (Barrel medic), partial
            (13%)
          Length = 741

 Score =  575 bits (290), Expect = e-163
 Identities = 290/290 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1481 aggcactccttgaacctgcaaaatcaattgcaactaacgctggagttgatggagatgttg 1540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68   aggcactccttgaacctgcaaaatcaattgcaactaacgctggagttgatggagatgttg 127

                                                                        
Query: 1541 ttgtccagaagattagaatatttgattggagaattggatataatgcaatgactggcacat 1600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128  ttgtccagaagattagaatatttgattggagaattggatataatgcaatgactggcacat 187

                                                                        
Query: 1601 atgaagatcttttgaatgctggagtagctgatcctagtcgagttgcaagatgtgctcttc 1660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188  atgaagatcttttgaatgctggagtagctgatcctagtcgagttgcaagatgtgctcttc 247

                                                                        
Query: 1661 aaagtgcggtatctgttgccggcgtggttctaacaactcaagctatattggtggaaaaaa 1720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248  aaagtgcggtatctgttgccggcgtggttctaacaactcaagctatattggtggaaaaaa 307

                                                              
Query: 1721 taaagacacccaagccacctgtgcccatgctccctggtataaatctctaa 1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308  taaagacacccaagccacctgtgcccatgctccctggtataaatctctaa 357