Miyakogusa Predicted Gene

Lj4g3v0620260.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0620260.1 tr|G7JK12|G7JK12_MEDTR Filament-like plant
protein OS=Medicago truncatula GN=MTR_4g085570 PE=4
SV=1,66.31,0,DUF869,Protein of unknown function DUF869, plant;
seg,NULL; coiled-coil,NULL; FAMILY NOT NAMED,NULL,CUFF.47792.1
         (3015 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75081 weakly similar to UniRef100_A7P9M4 Cluster: Chr...   343   4e-93

>gnl|LJGI|TC75081 weakly similar to UniRef100_A7P9M4 Cluster: Chromosome chr3
            scaffold_8, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 512

 Score =  343 bits (173), Expect = 4e-93
 Identities = 207/217 (95%), Gaps = 1/217 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2796 cctacttctacctgaaaaaagtgctttgcaaactcctcatatcatggttaatgcaccaga 2855
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 1    cctacttctacctgaaaaaagtgctttgccaactcctcatatcatggttaatgcacccga 60

                                                                        
Query: 2856 aacaagtattcattcagagcaaaataataaaagcagtgctattggatctctggcagttgt 2915
             || |||||||||||||||| |||| |||||||| ||||||||||||||||||| |||||
Sbjct: 61   caccagtattcattcagagccaaatcataaaagccgtgctattggatctctggccgttgt 120

                                                                        
Query: 2916 gccgtgtaaaaaacgaggaggctttgatttactgaggaagctgctgtttagacgaaagaa 2975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gccgtgtaaaaaacgaggaggctttgatttactgaggaagctgctgtttagacgaaagaa 180

                                                 
Query: 2976 agggcatgtta-aaaggaccaagtttttagccttagc 3011
            ||||||||||| |||||||| ||||||||||||||||
Sbjct: 181  agggcatgttacaaaggacccagtttttagccttagc 217