Miyakogusa Predicted Gene
- Lj4g3v0598860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0598860.1 tr|B9HS12|B9HS12_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_821232 PE=4
SV=1,35.2,8e-18,seg,NULL,CUFF.47635.1
(864 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67037 similar to UniRef100_A7P7Y2 Cluster: Chromosome... 1713 0.0
gnl|LJGI|TC62777 similar to UniRef100_A9P3A8 Cluster: Anther-spe... 299 1e-80
>gnl|LJGI|TC67037 similar to UniRef100_A7P7Y2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 1374
Score = 1713 bits (864), Expect = 0.0
Identities = 864/864 (100%)
Strand = Plus / Plus
Query: 1 atggaagaagatctccgtctccaccgtgaccttcagtcgcctccggttctgtccgatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atggaagaagatctccgtctccaccgtgaccttcagtcgcctccggttctgtccgatcct 171
Query: 61 gagttgactcgctccggttccgcctccagctcctccgccatcaccgctgacaaggagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gagttgactcgctccggttccgcctccagctcctccgccatcaccgctgacaaggagttc 231
Query: 121 tcgcgtaattgcacggactcttcgtttccggacgagtcggctagatggacagatcagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tcgcgtaattgcacggactcttcgtttccggacgagtcggctagatggacagatcagcag 291
Query: 181 cacagtctatatctcagttctttagaggcctcattcgtgaatgaattgcatcgttctata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cacagtctatatctcagttctttagaggcctcattcgtgaatgaattgcatcgttctata 351
Query: 241 aatttacgtggttggagctttcaaaataacacagatggagcatataaacatagaactctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aatttacgtggttggagctttcaaaataacacagatggagcatataaacatagaactctg 411
Query: 301 caaaagtcagttaatatgcctaagcagtctctggctctccaagatggctgccagaagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 caaaagtcagttaatatgcctaagcagtctctggctctccaagatggctgccagaagaag 471
Query: 361 accaaacttgaaagaattgcacctatgttagaaagtacagctgattctcatgttcatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 accaaacttgaaagaattgcacctatgttagaaagtacagctgattctcatgttcatgca 531
Query: 421 ggaagtcaattgggacttatacctatagatagagcttgcagtttgaaagagcatcatacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ggaagtcaattgggacttatacctatagatagagcttgcagtttgaaagagcatcatacc 591
Query: 481 tatgaccatgacttgccttgtgacgaggagattcatgctaaagggagtttaccattcacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tatgaccatgacttgccttgtgacgaggagattcatgctaaagggagtttaccattcacc 651
Query: 541 aacaagtcaccaagaagtagtgcgaagaagcaatgtcttttcccctcattccatgcagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aacaagtcaccaagaagtagtgcgaagaagcaatgtcttttcccctcattccatgcagaa 711
Query: 601 tcaagttgcagttctgcagaggtcaccgatcaaaatttcaaggatgaagtagccagttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tcaagttgcagttctgcagaggtcaccgatcaaaatttcaaggatgaagtagccagttca 771
Query: 661 agcaccatgcccatggctaaaaggttgaagacagctgcagcagatggttcaagtagagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 agcaccatgcccatggctaaaaggttgaagacagctgcagcagatggttcaagtagagat 831
Query: 721 caagttgtgccgtttgaaaagtttcacacatcagatgtttcaaatgcaacctcggaaaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 caagttgtgccgtttgaaaagtttcacacatcagatgtttcaaatgcaacctcggaaaag 891
Query: 781 aaagaacatgaattgcaatcggagctccgagcgagcattcacatcccgaagtctgatctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 aaagaacatgaattgcaatcggagctccgagcgagcattcacatcccgaagtctgatctg 951
Query: 841 cgttactttctaaagggtaggtaa 864
||||||||||||||||||||||||
Sbjct: 952 cgttactttctaaagggtaggtaa 975
>gnl|LJGI|TC62777 similar to UniRef100_A9P3A8 Cluster: Anther-specific proline rich
protein; n=1; Brassica rapa subsp. chinensis|Rep:
Anther-specific proline rich protein - Brassica rapa
subsp. chinensis (Pak-choi), partial (3%)
Length = 827
Score = 299 bits (151), Expect = 1e-80
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 1 atggaagaagatctccgtctccaccgtgaccttcagtcgcctccggttctgtccgatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggaagaagatctccgtctccaccgtgaccttcagtcgcctccggttctgtccgatcct 146
Query: 61 gagttgactcgctccggttccgcctccagctcctccgccatcaccgctgacaaggagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gagttgactcgctccggttccgcctccagctcctccgccatcaccgctgacaaggagttc 206
Query: 121 tcgcgtaattgcacggactcttcgtttccgg 151
|||||||||||||||||||||||||||||||
Sbjct: 207 tcgcgtaattgcacggactcttcgtttccgg 237