Miyakogusa Predicted Gene
- Lj4g3v0575720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0575720.1 Non Chatacterized Hit- tr|B9R7F1|B9R7F1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,52.46,0.00000000004,seg,NULL; DUF829,Protein of unknown function
DUF829, TMEM53; UNCHARACTERIZED,Protein of unknown func,CUFF.47623.1
(1260 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV408193 weakly similar to UniRef100_A7NTU2 Cluster: Ch... 670 0.0
gnl|LJGI|TC78356 254 1e-66
gnl|LJGI|TC61809 similar to UniRef100_A7P9H5 Cluster: Chromosome... 168 5e-41
>gnl|LJGI|AV408193 weakly similar to UniRef100_A7NTU2 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 338
Score = 670 bits (338), Expect = 0.0
Identities = 338/338 (100%)
Strand = Plus / Plus
Query: 560 gtttagatgctttatacctaactagctttgaatcccaagctgcggaacattggcaggctt 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttagatgctttatacctaactagctttgaatcccaagctgcggaacattggcaggctt 60
Query: 620 tgtattcttctgtaaattttggtgctccatttctcattttatgttctgagaatgatgacc 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtattcttctgtaaattttggtgctccatttctcattttatgttctgagaatgatgacc 120
Query: 680 ttgtgcgacaccaaagtgtctacgattttgcccaacgattacgcaatctcagcgctgatg 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtgcgacaccaaagtgtctacgattttgcccaacgattacgcaatctcagcgctgatg 180
Query: 740 ttaaccttgtaaattggagtaactcgcctcacgtcggtcactacaagcatcatccaattc 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaaccttgtaaattggagtaactcgcctcacgtcggtcactacaagcatcatccaattc 240
Query: 800 aatatagagctgcggtgagccaattcttggagaagtctgcttcaatatattcacagaaag 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatatagagctgcggtgagccaattcttggagaagtctgcttcaatatattcacagaaag 300
Query: 860 tgaaactcgaacaagaaaggatcggaacggatggtatg 897
||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaaactcgaacaagaaaggatcggaacggatggtatg 338
>gnl|LJGI|TC78356
Length = 775
Score = 254 bits (128), Expect = 1e-66
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1133 atgtttgtgttccgaaaaatgttgatggttgggatgtgaaattttctgggaatcggttgt 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtttgtgttccgaaaaatgttgatggttgggatgtgaaattttctgggaatcggttgt 60
Query: 1193 gtgcttcagcttcaaggcattcacctttaagaggtattaaacgcattggtcgctccagat 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcttcagcttcaaggcattcacctttaagaggtattaaacgcattggtcgctccagat 120
Query: 1253 tgtaagtt 1260
||||||||
Sbjct: 121 tgtaagtt 128
>gnl|LJGI|TC61809 similar to UniRef100_A7P9H5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 696
Score = 168 bits (85), Expect = 5e-41
Identities = 97/101 (96%)
Strand = Plus / Minus
Query: 94 ttcagaggaatcgttgtaatctttgcttgggtttctgttccgcagacactgttacaagat 153
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 334 ttcagaggaatcgttgtaatctttgcttgggtttctgttccacagacactgttacaagat 275
Query: 154 ttcgttaatttgtactcctctttgggttggaattctcttgt 194
|| ||| ||||||||||||||||||| ||||||||||||||
Sbjct: 274 tttgttgatttgtactcctctttgggctggaattctcttgt 234
Score = 56.0 bits (28), Expect = 6e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 43 tgtgccgtcagaggcggtaacatctatt 70
||||||||||||||||||||||||||||
Sbjct: 360 tgtgccgtcagaggcggtaacatctatt 333