Miyakogusa Predicted Gene

Lj4g3v0575060.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0575060.1 Non Chatacterized Hit- tr|I0YM07|I0YM07_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,35.88,1e-17,coiled-coil,NULL; ZF_MATRIN,Zinc finger, C2H2-type
matrin; U1-like zinc finger,Zinc finger, U1-type;,CUFF.47596.1
         (396 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69466 similar to UniRef100_Q69Y13 Cluster: Formin-bin...   785   0.0  
gnl|LJGI|TC81295 similar to UniRef100_Q69Y13 Cluster: Formin-bin...   486   e-137

>gnl|LJGI|TC69466 similar to UniRef100_Q69Y13 Cluster: Formin-binding
           protein-related-like; n=1; Oryza sativa Japonica
           Group|Rep: Formin-binding protein-related-like - Oryza
           sativa subsp. japonica (Rice), partial (77%)
          Length = 1145

 Score =  785 bits (396), Expect = 0.0
 Identities = 396/396 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactgagtactgggtcagccagggcaacaaatggtgtgatttttgcaaaatttatata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgactgagtactgggtcagccagggcaacaaatggtgtgatttttgcaaaatttatata 178

                                                                       
Query: 61  tcgaacaatccttcgagcataagaaatcatgagctcggtacacgtcacaaggataatgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tcgaacaatccttcgagcataagaaatcatgagctcggtacacgtcacaaggataatgtt 238

                                                                       
Query: 121 gccaagaggctggctgctatgcgaaaagagaatactgccaaggagaaagagcataaggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gccaagaggctggctgctatgcgaaaagagaatactgccaaggagaaagagcataaggaa 298

                                                                       
Query: 181 actgctcaagcccttgagcaaatcgaagctaaagcacagcgtagctatcaaaaggataaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 actgctcaagcccttgagcaaatcgaagctaaagcacagcgtagctatcaaaaggataaa 358

                                                                       
Query: 241 gcaaagcttgaggaagccagagaatggcatgaattggatgccgaagaatgggactttgaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gcaaagcttgaggaagccagagaatggcatgaattggatgccgaagaatgggactttgaa 418

                                                                       
Query: 301 agcagttcaggctattactaccataaaacaaatggattttattatgatccgaagtcggga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agcagttcaggctattactaccataaaacaaatggattttattatgatccgaagtcggga 478

                                               
Query: 361 ttttactactctgacgccataggcaagtgggtgacc 396
           ||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttttactactctgacgccataggcaagtgggtgacc 514


>gnl|LJGI|TC81295 similar to UniRef100_Q69Y13 Cluster: Formin-binding
           protein-related-like; n=1; Oryza sativa Japonica
           Group|Rep: Formin-binding protein-related-like - Oryza
           sativa subsp. japonica (Rice), partial (33%)
          Length = 404

 Score =  486 bits (245), Expect = e-137
 Identities = 245/245 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactgagtactgggtcagccagggcaacaaatggtgtgatttttgcaaaatttatata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atgactgagtactgggtcagccagggcaacaaatggtgtgatttttgcaaaatttatata 219

                                                                       
Query: 61  tcgaacaatccttcgagcataagaaatcatgagctcggtacacgtcacaaggataatgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tcgaacaatccttcgagcataagaaatcatgagctcggtacacgtcacaaggataatgtt 279

                                                                       
Query: 121 gccaagaggctggctgctatgcgaaaagagaatactgccaaggagaaagagcataaggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gccaagaggctggctgctatgcgaaaagagaatactgccaaggagaaagagcataaggaa 339

                                                                       
Query: 181 actgctcaagcccttgagcaaatcgaagctaaagcacagcgtagctatcaaaaggataaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 actgctcaagcccttgagcaaatcgaagctaaagcacagcgtagctatcaaaaggataaa 399

                
Query: 241 gcaaa 245
           |||||
Sbjct: 400 gcaaa 404