Miyakogusa Predicted Gene
- Lj4g3v0526630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0526630.1 tr|G7JNK6|G7JNK6_MEDTR Sorting nexin-16
OS=Medicago truncatula GN=MTR_4g087210 PE=4 SV=1,73.6,0,no
description,Phox homologous domain; PX domain,Phox homologous domain;
PX,Phox homologous domain; ,CUFF.47565.1
(2220 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO025360 similar to UniRef100_A7P9B0 Cluster: Chromosom... 1130 0.0
gnl|LJGI|AV778511 similar to UniRef100_A7P9B0 Cluster: Chromosom... 280 4e-74
gnl|LJGI|AV780954 similar to UniRef100_A7P9B0 Cluster: Chromosom... 74 4e-12
>gnl|LJGI|GO025360 similar to UniRef100_A7P9B0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (15%)
Length = 575
Score = 1130 bits (570), Expect = 0.0
Identities = 573/574 (99%)
Strand = Plus / Plus
Query: 786 atttcctaagctccgttgccgggttatgggagcatattttgagaaacttgggtccacatg 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atttcctaagctccgttgccgggttatgggagcatattttgagaaacttgggtccacatg 61
Query: 846 ttttgctgtctattcaattgcagtgactgatgcacaaaatagaacttggtttgtgaaaag 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttttgctgtctattcaattgcagtgactgatgcacaaaatagaacttggtttgtgaaaag 121
Query: 906 aagatacaggaattttgagcgtctacatcggtatcttaaagatattccaaattacacatt 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aagatacaggaattttgagcgtctacatcggtatcttaaagatattccaaattacacatt 181
Query: 966 gcatttgcctcctaaaaggatattttcctcaagcacagatgatgcttttgtacatcaacg 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gcatttgcctcctaaaaggatattttcctcaagcacagatgatgcttttgtacatcaacg 241
Query: 1026 ttgcattcagcttgataaatatctccaggatctcctgtcaatagctaatgttgctgaaca 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttgcattcagcttgataaatatctccaggatctcctgtcaatagctaatgttgctgaaca 301
Query: 1086 acatgaagtatgggactttttcagtgtttcctctaagaactactctttcgggaaatcttc 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acatgaagtatgggactttttcagtgtttcctctaagaactactctttcgggaaatcttc 361
Query: 1146 ttcggtgatgaagaccttggcagtcaatgtagatgatgctgtggatgatattgtacggca 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttcggtgatgaagaccttggcagtcaatgtagatgatgctgtggatgatattgtacggca 421
Query: 1206 gttcaaaggggtttcagatggtttaatgcgaaaggttgttcgttcaccaatcctcatcaa 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gttcaaaggggtttcagatggtttaatgcgaaaggttgttcgttcaccaatcctcatcaa 481
Query: 1266 tgagggatcttctacatctaccacatggaacatggaatggaatgctgatgaaatagatag 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgagggatcttctacatctaccacatggaacatggaatggaatgctgatgaaatagatag 541
Query: 1326 aagtattccagggcaaagtactacggatagtgta 1359
||||||||||||||||||||| ||||||||||||
Sbjct: 542 aagtattccagggcaaagtaccacggatagtgta 575
>gnl|LJGI|AV778511 similar to UniRef100_A7P9B0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 506
Score = 280 bits (141), Expect = 4e-74
Identities = 144/145 (99%)
Strand = Plus / Minus
Query: 2068 tgtgcgagggatatatattactttagtcagtctactatatgtgtgaaacaacttgcttat 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgtgcgagggatatatattactttagtcagtctactatatgtgtgaaacaacttgcttat 447
Query: 2128 gcaatcctggaacttcttctcgtctccatcttccccgagacgcggaatgttgtgttgagt 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gcaatcctggaacttcttctcgtctccatcttccccgagacgcggaatgttgtgttgagt 387
Query: 2188 gttcgtgagagtgtgcatgttcacc 2212
||||||||||||||||||||||||
Sbjct: 386 attcgtgagagtgtgcatgttcacc 362
>gnl|LJGI|AV780954 similar to UniRef100_A7P9B0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (3%)
Length = 470
Score = 73.8 bits (37), Expect = 4e-12
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 2096 agtctactatatgtgtgaaacaacttgcttatgcaatcctggaacttcttctcgtctcca 2155
||||| |||||||||| || |||||||||||||||||||| ||||| || ||| | ||
Sbjct: 371 agtcttctatatgtgtaaagcaacttgcttatgcaatccttgaactcctgctcatatctg 312
Query: 2156 tcttccccgagacgcggaatgttgtgttgagtgttcgtgagagtgtgcatgttcacc 2212
||||||| || ||| |||||||| ||||||||| ||||| | ||||||||||||
Sbjct: 311 tcttccctgacttgcgcaatgttgtcatgagtgttcatgagaatatgcatgttcacc 255