Miyakogusa Predicted Gene

Lj4g3v0523550.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0523550.1 Non Chatacterized Hit- tr|A5BRP5|A5BRP5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80.95,0.000000000002,5'-3' exonuclease,5'-3' exonuclease,
N-terminal; Helix-hairpin-helix class 2 (Pol1 family)
mo,Helix-,CUFF.47566.1
         (1296 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW610948 similar to UniRef100_A7QAR5 Cluster: Chromosom...   858   0.0  

>gnl|LJGI|BW610948 similar to UniRef100_A7QAR5 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 461

 Score =  858 bits (433), Expect = 0.0
 Identities = 433/433 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtgctcctttaagcaccacctcttgctcctccactcacattccctctcgagaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29  atggcgtgctcctttaagcaccacctcttgctcctccactcacattccctctcgagaata 88

                                                                       
Query: 61  gtccccttccgccgcttccaccgaatcgccaccgccggcagccactctcgcagccttcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  gtccccttccgccgcttccaccgaatcgccaccgccggcagccactctcgcagccttcaa 148

                                                                       
Query: 121 acgccgaagcttcttcgttcttcgcgccgcacaccgctctcgaagggttattgtcgtgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 acgccgaagcttcttcgttcttcgcgccgcacaccgctctcgaagggttattgtcgtgca 208

                                                                       
Query: 181 tctctgaattcgcctgtttctgcaacgagcactgcaccgttggttcctgaaactagatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tctctgaattcgcctgtttctgcaacgagcactgcaccgttggttcctgaaactagatgt 268

                                                                       
Query: 241 ggacctgttcaattgccacttggttctgcggaggagcgtgcggcgaacactgataatggc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggacctgttcaattgccacttggttctgcggaggagcgtgcggcgaacactgataatggc 328

                                                                       
Query: 301 agagtaatgctcgttgatggtacatcggttattcatagagcatactacaagctcttagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agagtaatgctcgttgatggtacatcggttattcatagagcatactacaagctcttagca 388

                                                                       
Query: 361 aaattgcaccacggtcatctaacacatgcggatggaaatggagattgggttttaacaata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aaattgcaccacggtcatctaacacatgcggatggaaatggagattgggttttaacaata 448

                        
Query: 421 tttacggcattat 433
           |||||||||||||
Sbjct: 449 tttacggcattat 461