Miyakogusa Predicted Gene
- Lj4g3v0510310.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0510310.2 Non Chatacterized Hit- tr|G4TZ35|G4TZ35_PIRID
Putative uncharacterized protein OS=Piriformospora
ind,37.29,3.7,seg,NULL,CUFF.47550.2
(189 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58860 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribo... 367 e-101
gnl|LJGI|FS343626 similar to UniRef100_A6MZZ6 Cluster: H/ACA rib... 309 3e-84
gnl|LJGI|GO036905 UniRef100_A6ZEA0 Cluster: Eukaryotic translati... 212 6e-55
gnl|LJGI|TC77340 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribo... 206 3e-53
gnl|LJGI|TC61677 similar to UniRef100_A7P685 Cluster: Chromosome... 127 3e-29
gnl|LJGI|FS326550 84 3e-16
gnl|LJGI|TC82251 72 1e-12
gnl|LJGI|GO031824 similar to UniRef100_A5B6U7 Cluster: Enolase; ... 58 2e-08
gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Aux... 58 2e-08
gnl|LJGI|TC70498 weakly similar to UniRef100_A7WM73 Cluster: Bet... 56 8e-08
gnl|LJGI|TC70164 50 5e-06
>gnl|LJGI|TC58860 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (29%)
Length = 1269
Score = 367 bits (185), Expect = e-101
Identities = 188/189 (99%)
Strand = Plus / Plus
Query: 1 atgcatctgcaaaggttgaatcctttagcaaatgatgagcttgaaaccatgatagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atgcatctgcaaaggttgaatcctttagcaaatgatgagcttgaaaccatgatagagaag 774
Query: 61 catggaagatcagaccaaggtttattaggaagtgggagatggcacctactgctaaacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 catggaagatcagaccaaggtttattaggaagtgggagatggcacctactgctaaacctt 834
Query: 121 ctaaatttgcaacttgtcttgattgatgctaaggtattttgcaaatgctatgacttcagt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 835 ctaaatttgcaacttgtcttgattgatgctaaggtattttgcaaatactatgacttcagt 894
Query: 181 tcatgaaat 189
|||||||||
Sbjct: 895 tcatgaaat 903
>gnl|LJGI|FS343626 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (29%)
Length = 687
Score = 309 bits (156), Expect = 3e-84
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 34 gatgagcttgaaaccatgatagagaagcatggaagatcagaccaaggtttattaggaagt 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gatgagcttgaaaccatgatagagaagcatggaagatcagaccaaggtttattaggaagt 225
Query: 94 gggagatggcacctactgctaaaccttctaaatttgcaacttgtcttgattgatgctaag 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gggagatggcacctactgctaaaccttctaaatttgcaacttgtcttgattgatgctaag 285
Query: 154 gtattttgcaaatgctatgacttcagttcatgaaat 189
||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtattttgcaaatgctatgacttcagttcatgaaat 321
>gnl|LJGI|GO036905 UniRef100_A6ZEA0 Cluster: Eukaryotic translation initiation factor;
n=1; Artemisia annua|Rep: Eukaryotic translation
initiation factor - Artemisia annua (Sweet wormwood),
partial (6%)
Length = 698
Score = 212 bits (107), Expect = 6e-55
Identities = 116/119 (97%)
Strand = Plus / Plus
Query: 35 atgagcttgaaaccatgatagagaagcatggaagatcagaccaaggtttattaggaagtg 94
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atgagcttggaaccatgatagagaagcatggaagatcagaccaaggtttattaggaagtg 590
Query: 95 ggagatggcacctactgctaaaccttctaaatttgcaacttgtcttgattgatgctaag 153
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 591 ggagatggcacctacggctaaaccttataaatttgcaacttgtcttgattgatgctaag 649
>gnl|LJGI|TC77340 similar to UniRef100_A6MZZ6 Cluster: H/ACA ribonucleoprotein
complex subunit 2; n=2; Oryza sativa|Rep: H/ACA
ribonucleoprotein complex subunit 2 - Oryza sativa
subsp. indica (Rice), partial (21%)
Length = 478
Score = 206 bits (104), Expect = 3e-53
Identities = 144/156 (92%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 34 gatgagcttgaaaccatgatagagaagcatggaagatcagaccaaggtttattaggaagt 93
|||||| |||||||||||||||||||||||||||||||||||| | ||||| |||| ||
Sbjct: 5 gatgaggttgaaaccatgatagagaagcatggaagatcagaccccgatttataaggaggt 64
Query: 94 gggagatggcacctactgctaaaccttctaaatttgcaacttgtcttgattgatgctaag 153
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 65 gggagatggtacctactgctaaaccttctcaatttgcaacttgtcttgattgatgctaa- 123
Query: 154 gtattttgcaaatgctatgacttcagttcatgaaat 189
|||| |||||| |||| |||||||||||||||||||
Sbjct: 124 gtatgttgcaactgctgtgacttcagttcatgaaat 159
>gnl|LJGI|TC61677 similar to UniRef100_A7P685 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 707
Score = 127 bits (64), Expect = 3e-29
Identities = 124/145 (85%), Gaps = 8/145 (5%)
Strand = Plus / Plus
Query: 53 tagagaagcatggaagatcagaccaaggtttattaggaagtgggagatggcacctactgc 112
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |
Sbjct: 349 tagagaagcatggaagatcagagcaagggttattaggaagtgggagatggcaccaacggt 408
Query: 113 taaaccttctaaa--------tttgcaacttgtcttgattgatgctaaggtattttgcaa 164
| ||||||||||| ||||| ||||||||||||||||||| |||||| | |||
Sbjct: 409 tgaaccttctaaactagatgctttgctacttgtcttgattgatgctgaggtatgtaacaa 468
Query: 165 atgctatgacttcagttcatgaaat 189
|||| |||||||||||||||||||
Sbjct: 469 ctgctgtgacttcagttcatgaaat 493
>gnl|LJGI|FS326550
Length = 721
Score = 83.8 bits (42), Expect = 3e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 53 tagagaagcatggaagatcagaccaaggt-ttattaggaagtgggagatggcacctactg 111
|||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| |
Sbjct: 621 tagagaagcatggaagatcagagcaaggggttattaggaagtgggagatggcgcctacag 680
Query: 112 ctaaaccttc 121
|| |||||||
Sbjct: 681 ctgaaccttc 690
>gnl|LJGI|TC82251
Length = 534
Score = 71.9 bits (36), Expect = 1e-12
Identities = 75/89 (84%), Gaps = 8/89 (8%)
Strand = Plus / Plus
Query: 77 aaggtttattaggaagtgggagatggcacctactgctaaaccttctaaa--------ttt 128
|||| |||||||||||||||||||| |||||||| ||||||||||| || |||
Sbjct: 2 aagggttattaggaagtgggagatgtcacctactactaaaccttctcaaccagatctttt 61
Query: 129 gcaacttgtcttgattgatgctaaggtat 157
|| ||||||||||||||||||| ||||||
Sbjct: 62 gcgacttgtcttgattgatgctgaggtat 90
>gnl|LJGI|GO031824 similar to UniRef100_A5B6U7 Cluster: Enolase; n=1; Vitis
vinifera|Rep: Enolase - Vitis vinifera (Grape), partial
(4%)
Length = 566
Score = 58.0 bits (29), Expect = 2e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 53 tagagaagcatggaagatcagaccaaggtttattaggaagtgggagatggcacctactgc 112
|||||||||||||| ||||||| ||||| | ||| |||| ||||||||||| || ||| |
Sbjct: 139 tagagaagcatggaggatcagagcaagggtgattcggaaatgggagatggctccaacttc 198
Query: 113 taaaccttc 121
| |||||||
Sbjct: 199 tgaaccttc 207
>gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Auxin response factor
1; n=1; Cucumis sativus|Rep: Auxin response factor 1 -
Cucumis sativus (Cucumber), partial (3%)
Length = 1324
Score = 58.0 bits (29), Expect = 2e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 53 tagagaagcatggaagatcagaccaaggtttattaggaagtgggagatggcacctac 109
||||||| |||||||||||||| ||||| | || |||||||||||||| || |||||
Sbjct: 653 tagagaatcatggaagatcagagcaagggtcataaggaagtgggagatagctcctac 709
>gnl|LJGI|TC70498 weakly similar to UniRef100_A7WM73 Cluster:
Beta-N-acetylhexosaminidase; n=2; Arabidopsis
thaliana|Rep: Beta-N-acetylhexosaminidase - Arabidopsis
thaliana (Mouse-ear cress), partial (5%)
Length = 1080
Score = 56.0 bits (28), Expect = 8e-08
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 54 agagaagcatggaagatcagaccaaggtttattaggaagtgggagatg 101
|||||||||| |||||||||| | ||| |||||| |||||||||||||
Sbjct: 353 agagaagcattgaagatcagagcgagggttattatgaagtgggagatg 400
>gnl|LJGI|TC70164
Length = 666
Score = 50.1 bits (25), Expect = 5e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 53 tagagaagcatggaagatcagaccaaggtttattaggaagtgggagatggcacctactgc 112
||||| ||| |||||||| | | || || |||||||||||| ||||||| | ||||||||
Sbjct: 590 tagagtagcctggaagattaaagcaggggttattaggaagtaggagatgtcccctactgc 649
Query: 113 taaaccttc 121
| |||||||
Sbjct: 650 tgaaccttc 658