Miyakogusa Predicted Gene

Lj4g3v0510070.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0510070.1 Non Chatacterized Hit- tr|Q5GAR1|Q5GAR1_MAIZE
Putative uncharacterized protein OS=Zea mays GN=B9008
,50.62,0.0000000001,seg,NULL; coiled-coil,NULL,CUFF.47529.1
         (495 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71167 similar to UniRef100_A7QAV9 Cluster: Chromosome...   940   0.0  
gnl|LJGI|DC599052 similar to UniRef100_A7QAV9 Cluster: Chromosom...   400   e-111

>gnl|LJGI|TC71167 similar to UniRef100_A7QAV9 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (97%)
          Length = 911

 Score =  940 bits (474), Expect = 0.0
 Identities = 488/495 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggaaaaatcaagcctacaaagctatgcaacgagccaggctcggcggcgcctccgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atggggaaaaatcaagcctacaaagctatgcaacgagccaggctcggcggcgcctccgcc 209

                                                                       
Query: 61  ggccccgacgaggttgaagacggcatggtggatggttcatttcattcaccagagtggcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ggccccgacgaggttgaagacggcatggtggatggttcatttcattcaccagagtggcat 269

                                                                       
Query: 121 gcagctcgtttggctagccttaaaacatctcacacagttacatgggaagagttcaaacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gcagctcgtttggctagccttaaaacatctcacacagttacatgggaagagttcaaacag 329

                                                                       
Query: 181 aaacaaaaggaagaagagatgagaaaaggagagttggaagcagatgcagatagaatgatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aaacaaaaggaagaagagatgagaaaaggagagttggaagcagatgcagatagaatgatg 389

                                                                       
Query: 241 agggagtacagagctcaactagatgctgaaaggtctcgcaaactttcacagggaagaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agggagtacagagctcaactagatgctgaaaggtctcgcaaactttcacagggaagaaat 449

                                                                       
Query: 301 cactctggtagtaagtccaaacacgcaaaagataagaaggacagaatttcaaagaagcac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cactctggtagtaagtccaaacacgcaaaagataagaaggacagaatttcaaagaagcac 509

                                                                       
Query: 361 agcagcnnnnnnngaaagcattcaagaagatcgtctgcatctagctcgtcttcgtcatcc 420
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agcagcaaaaaaagaaagcattcaagaagatcgtctgcatctagctcgtcttcgtcatcc 569

                                                                       
Query: 421 tctgattctagtagtgatgaagaagagagagtgtcaagaagatcaaagtccaggtctaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tctgattctagtagtgatgaagaagagagagtgtcaagaagatcaaagtccaggtctaag 629

                          
Query: 481 agatcaaagaaggag 495
           |||||||||||||||
Sbjct: 630 agatcaaagaaggag 644


>gnl|LJGI|DC599052 similar to UniRef100_A7QAV9 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 433

 Score =  400 bits (202), Expect = e-111
 Identities = 205/206 (99%)
 Strand = Plus / Plus

                                                                       
Query: 112 gagtggcatgcagctcgtttggctagccttaaaacatctcacacagttacatgggaagag 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gagtggcatgcagctcgtttggctagccttaaaacatctcacacagttacatgggaagag 287

                                                                       
Query: 172 ttcaaacagaaacaaaaggaagaagagatgagaaaaggagagttggaagcagatgcagat 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttcaaacagaaacaaaaggaagaagagatgagaaaaggagagttggaagcagatgcagat 347

                                                                       
Query: 232 agaatgatgagggagtacagagctcaactagatgctgaaaggtctcgcaaactttcacag 291
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agaaggatgagggagtacagagctcaactagatgctgaaaggtctcgcaaactttcacag 407

                                     
Query: 292 ggaagaaatcactctggtagtaagtc 317
           ||||||||||||||||||||||||||
Sbjct: 408 ggaagaaatcactctggtagtaagtc 433



 Score =  172 bits (87), Expect = 1e-42
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggaaaaatcaagcctacaaagctatgcaacgagccaggctcggcggcgcctccgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atggggaaaaatcaagcctacaaagctatgcaacgagccaggctcggcggcgcctccgcc 201

                                      
Query: 61  ggccccgacgaggttgaagacggcatg 87
           |||||||||||||||||||||||||||
Sbjct: 202 ggccccgacgaggttgaagacggcatg 228