Miyakogusa Predicted Gene

Lj4g3v0510040.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0510040.1 CUFF.47527.1
         (408 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome...   184   3e-46
gnl|LJGI|TC82529 similar to UniRef100_A7P2L3 Cluster: Chromosome...    54   7e-07

>gnl|LJGI|TC75343 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 1178

 Score =  184 bits (93), Expect = 3e-46
 Identities = 111/117 (94%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaaattcctcttgaattgatgctaaccataagcaagaagctaccgtggatgtttttccct 63
           ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||
Sbjct: 590 gaaattcctcttgaattgatgctaaccataagcaagatgctactgtggatgcttttccct 649

                                                                    
Query: 64  gatataattcccattggtcatccaatatttgatattatcaacccggcaagtccagag 120
           |||||||||||||||||||||||||||||||||||||||||| || ||| |||||||
Sbjct: 650 gatataattcccattggtcatccaatatttgatattatcaactcgacaaatccagag 706



 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 376 ggaggaacttttggagctgcaggatcctaat 406
           |||||||||||||||||||||||||||||||
Sbjct: 706 ggaggaacttttggagctgcaggatcctaat 736


>gnl|LJGI|TC82529 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 688

 Score = 54.0 bits (27), Expect = 7e-07
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 376 ggaggaacttttggagctgcaggatcctaat 406
           ||||||||||||||||||||| |||||||||
Sbjct: 155 ggaggaacttttggagctgcaagatcctaat 185