Miyakogusa Predicted Gene
- Lj4g3v0484820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0484820.1 tr|D3GBU6|D3GBU6_LOTJA Auxin response factor 3a
OS=Lotus japonicus GN=ARF3a PE=2 SV=1,99.76,0,FAMILY NOT NAMED,NULL;
Auxin_resp,Auxin response factor,CUFF.47416.1
(1230 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81860 similar to UniRef100_A2Q532 Cluster: Transcript... 1215 0.0
gnl|LJGI|TC57738 similar to UniRef100_A2Q532 Cluster: Transcript... 80 4e-14
>gnl|LJGI|TC81860 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3; Auxin
response factor; n=1; Medicago truncatula|Rep:
Transcriptional factor B3; Auxin response factor -
Medicago truncatula (Barrel medic), partial (3%)
Length = 882
Score = 1215 bits (613), Expect = 0.0
Identities = 616/617 (99%)
Strand = Plus / Plus
Query: 614 gtggctttggagtttttgatggttaccaggtgctgagatccagaaatggatggtcaaccc 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggctttggagtttttgatggttaccaggtgctgagatccagaaatggatggtcaaccc 60
Query: 674 atatgaacaaccatccttcacatttgcatcaatctgttccagccgggcaagtttcatctc 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatgaacaaccatccttcacatttgcatcaatctgttccagccgggcaagtttcatctc 120
Query: 734 cttcatctgtgttaacgtttcagcaatcaatcaatcaaggtgtgaacttggagaccaata 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcatctgtgttaacgtttcagcaatcaatcaatcaaggtgtgaacttggagaccaata 180
Query: 794 acaaaaccaatcaggtgatggagggtagagtccaccaccaaggcttatatccttcaacaa 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaaaaccaatcaggtgatggagggtagagtccaccaccaaggcttatatccttcaacaa 240
Query: 854 tgaaaggtggaacgtttgtatcaaccccctcttgtgagcctagtttccgccggcaagctc 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaaaggtggaacgtttgtatcaaccccctcttgtgagcctagtttccgccggcaagctc 300
Query: 914 aggaagatgctaattctttgggttttataaatttgcataatcagttggatagttcacact 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggaagatgctaattctttgggttttataaatttgcataatcagttggatagttcacact 360
Query: 974 cacatgatcctatttcactactgagaggccctcaagaggtggtttcctcatgtaaaagta 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacatgatcctatttcactactgagaggccctcaagaggtggtttcctcatgtaaaagta 420
Query: 1034 gctgcagagtctttggtttttcattaactgagggtgctcgcagtgcaaatgaggaggctg 1093
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgcagagtctttggtttttcagtaactgagggtgctcgcagtgcaaatgaggaggctg 480
Query: 1094 acccatctacagtcacttgtcaattaaatcctggaacttcttttatcagacacgtcgaag 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acccatctacagtcacttgtcaattaaatcctggaacttcttttatcagacacgtcgaag 540
Query: 1154 atgatttccgtccaaggcattcgcttcggagcaaggcagttggaaaatattgtagcaaag 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgatttccgtccaaggcattcgcttcggagcaaggcagttggaaaatattgtagcaaag 600
Query: 1214 aagtgctgcagtattga 1230
|||||||||||||||||
Sbjct: 601 aagtgctgcagtattga 617
>gnl|LJGI|TC57738 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3; Auxin
response factor; n=1; Medicago truncatula|Rep:
Transcriptional factor B3; Auxin response factor -
Medicago truncatula (Barrel medic), partial (15%)
Length = 926
Score = 79.8 bits (40), Expect = 4e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 1005 tcaagaggtggtttcctcatgtaaaagtagctgcagagtctttggtttttcattaactga 1064
||||||| ||||| ||||||| |||||| |||||||| ||||||||||||||||||||||
Sbjct: 406 tcaagagttggttccctcatgcaaaagtggctgcagactctttggtttttcattaactga 465
Score = 60.0 bits (30), Expect = 3e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 689 cttcacatttgcatcaatctgttccagccgggcaagtttcatctccttcatctgtgttaa 748
||||||||||||| ||| ||| || |||||||||| |||||||| |||||||||||||
Sbjct: 99 cttcacatttgcacacatcagttacatccgggcaagtgtcatctccatcatctgtgttaa 158
Query: 749 cgtttcagca 758
||| |||||
Sbjct: 159 tgttccagca 168