Miyakogusa Predicted Gene
- Lj4g3v0484090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0484090.1 Non Chatacterized Hit- tr|I1M068|I1M068_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11183
PE,92.26,0,seg,NULL; Multidrug resistance efflux transporter
EmrE,NULL; TPT,Domain of unknown function DUF250;
,NODE_11017_length_489_cov_2994.051025.path3.1
(468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61231 homologue to UniRef100_P21727 Cluster: Triose p... 928 0.0
gnl|LJGI|TC57670 homologue to UniRef100_P21727 Cluster: Triose p... 801 0.0
gnl|LJGI|AV771700 homologue to UniRef100_A7P2G6 Cluster: Chromos... 280 7e-75
gnl|LJGI|AV771015 66 2e-10
>gnl|LJGI|TC61231 homologue to UniRef100_P21727 Cluster: Triose phosphate/phosphate
translocator, chloroplast precursor; n=1; Pisum
sativum|Rep: Triose phosphate/phosphate translocator,
chloroplast precursor - Pisum sativum (Garden pea),
partial (44%)
Length = 827
Score = 928 bits (468), Expect = 0.0
Identities = 468/468 (100%)
Strand = Plus / Plus
Query: 1 atgatttcaaacatttccttcacataccggagcatctactcaaagaaagccatgactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atgatttcaaacatttccttcacataccggagcatctactcaaagaaagccatgactgat 127
Query: 61 atggatagcaccaatctctatgcttacatctccatcattgctctaattgtctgcctacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atggatagcaccaatctctatgcttacatctccatcattgctctaattgtctgcctacca 187
Query: 121 ccggccataattctggaagggcctgtactgttgaagcatggcttcaatgatgcaattgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccggccataattctggaagggcctgtactgttgaagcatggcttcaatgatgcaattgcc 247
Query: 181 aaagtaggtcttgtcaagttcgtcacagatctcttctgggttgggatgttttaccacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaagtaggtcttgtcaagttcgtcacagatctcttctgggttgggatgttttaccacctc 307
Query: 241 tacaaccaggtggccaccaacacactggagagagtggctcctctcactcatgcagttggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tacaaccaggtggccaccaacacactggagagagtggctcctctcactcatgcagttggc 367
Query: 301 aacgtactgaaacgtgtatttgtgattggattttcaattattatcttcggtaacaggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aacgtactgaaacgtgtatttgtgattggattttcaattattatcttcggtaacaggatt 427
Query: 361 tccacccaaactggtattggaacagcaattgcaattgctggagtggcaatctactcgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tccacccaaactggtattggaacagcaattgcaattgctggagtggcaatctactcgctt 487
Query: 421 atcaaagccaggatcgaggaagagaagcgacaagcgaaagcagcataa 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 atcaaagccaggatcgaggaagagaagcgacaagcgaaagcagcataa 535
>gnl|LJGI|TC57670 homologue to UniRef100_P21727 Cluster: Triose phosphate/phosphate
translocator, chloroplast precursor; n=1; Pisum
sativum|Rep: Triose phosphate/phosphate translocator,
chloroplast precursor - Pisum sativum (Garden pea),
partial (87%)
Length = 1255
Score = 801 bits (404), Expect = 0.0
Identities = 435/440 (98%), Gaps = 4/440 (0%)
Strand = Plus / Plus
Query: 1 atgatttcaaacatttccttcacataccggagcatctactcaaagaaagccatgactgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 atgatttcaaacatttccttcacataccggagcatctactcaaagaaagccatgactgat 866
Query: 61 atggatagcaccaatctctatgcttacatctccatcattgctctaattgtctgcctacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 atggatagcaccaatctctatgcttacatctccatcattgctctaattgtctgcctacca 926
Query: 121 ccggccataattctggaagggcctgtactgttgaagcatggcttcaatgatgcaattgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 ccggccataattctggaagggcctgtactgttgaagcatggcttcaatgatgcaattgcc 986
Query: 181 aaagtaggtcttgtcaagttcgtcacagatctcttctgggttgggatgttttaccacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 aaagtaggtcttgtcaagttcgtcacagatctcttctgggttgggatgttttaccacctc 1046
Query: 241 tacaaccaggtggccaccaacacactggagagagtggctcctctcactcatgcagttggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 tacaaccaggtggccaccaacacactggagagagtggctcctctcactcatgcagttggc 1106
Query: 301 aacgtactgaaacgtgtatttgtgattggattttcaattattatcttcggtaacaggatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1107 aacgtactgaaacgtgtatttgtgattggattttcaattattatcttcggtaaca-gatt 1165
Query: 361 tccacccaaactggtattggaacagcaattgcaattgctggagtggcaatctactcgctt 420
|||||||||||||||| ||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 1166 tccacccaaactggta-tgggacagc-attgcaattgctggagtggc-atctactcgctt 1222
Query: 421 atcaaagccaggatcgagga 440
||||||||||||||||||||
Sbjct: 1223 atcaaagccaggatcgagga 1242
>gnl|LJGI|AV771700 homologue to UniRef100_A7P2G6 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 488
Score = 280 bits (141), Expect = 7e-75
Identities = 153/157 (97%)
Strand = Plus / Minus
Query: 267 ggagagagtggctcctctcactcatgcagttggcaacgtactgaaacgtgtatttgtgat 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggagagagtggctcctctcactcatgcagttggcaacgtactgaaacgtgtatttgtgat 429
Query: 327 tggattttcaattattatcttcggtaacaggatttccacccaaactggtattggaacagc 386
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 428 tggattttcaattattatcttcggtaacaggatttccatcccaactggtattggaacagc 369
Query: 387 aattgcaattgctggagtggcaatctactcgcttatc 423
||||| ||||||||||||||||||||||||||||||
Sbjct: 368 cattgccattgctggagtggcaatctactcgcttatc 332
>gnl|LJGI|AV771015
Length = 379
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 411 ctactcgcttatcaaagccaggatcgaggaagagaagcgac 451
||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 331 ctactcgcttatccaagccaggatcgaggcagagaagcgac 291