Miyakogusa Predicted Gene

Lj4g3v0483910.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0483910.1 tr|B9P619|B9P619_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_829141 PE=4
SV=1,49.6,4e-16,seg,NULL,NODE_99899_length_735_cov_15.107483.path2.1
         (432 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69801 weakly similar to UniRef100_A7NZ22 Cluster: Chr...   856   0.0  

>gnl|LJGI|TC69801 weakly similar to UniRef100_A7NZ22 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (16%)
          Length = 895

 Score =  856 bits (432), Expect = 0.0
 Identities = 432/432 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtttcagagaatgaagagatgcctagtggatggccatttggtcttggctttttgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 atggtttcagagaatgaagagatgcctagtggatggccatttggtcttggctttttgaat 258

                                                                       
Query: 61  atgagactaagaattgcagaatcactcgcagctgctccggcagagccctactcagtgcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atgagactaagaattgcagaatcactcgcagctgctccggcagagccctactcagtgcac 318

                                                                       
Query: 121 atcccatccaacagtttttcctcattctcaacctccaaccttgatactgagtccacagca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atcccatccaacagtttttcctcattctcaacctccaaccttgatactgagtccacagca 378

                                                                       
Query: 181 tctttctttcaagacaagagtgtatccctggggtatctgattggaattagacaaggtgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tctttctttcaagacaagagtgtatccctggggtatctgattggaattagacaaggtgaa 438

                                                                       
Query: 241 agaagacgcttgcacttgggaaattcattgagatttgaagaaatggagatgaaaacatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaagacgcttgcacttgggaaattcattgagatttgaagaaatggagatgaaaacatta 498

                                                                       
Query: 301 gcaaagggttcctgttctgaagcatctaaattagaagaaatgtgtatgtgtatgtcttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcaaagggttcctgttctgaagcatctaaattagaagaaatgtgtatgtgtatgtcttgt 558

                                                                       
Query: 361 ggcatttgcatacccaaattgcttaatgccctacaaaagattaacaaaagtaaaaaaggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggcatttgcatacccaaattgcttaatgccctacaaaagattaacaaaagtaaaaaaggt 618

                       
Query: 421 acaaggaactag 432
           ||||||||||||
Sbjct: 619 acaaggaactag 630