Miyakogusa Predicted Gene
- Lj4g3v0473620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0473620.1 Non Chatacterized Hit- tr|I1MEM6|I1MEM6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,39.35,3e-18,seg,NULL,CUFF.47431.1
(894 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63599 1013 0.0
gnl|LJGI|GO007877 weakly similar to UniRef100_Q41725 Cluster: TE... 523 e-148
gnl|LJGI|BW598956 337 7e-92
gnl|LJGI|BP046165 weakly similar to UniRef100_Q7XDI5 Cluster: RN... 149 3e-35
gnl|LJGI|BW597966 103 2e-21
gnl|LJGI|AV776530 similar to UniRef100_Q4R945 Cluster: Dual spec... 96 5e-19
gnl|LJGI|TC64379 similar to UniRef100_Q01197 Cluster: Protein E6... 82 7e-15
gnl|LJGI|AV775816 similar to UniRef100_Q4ITW2 Cluster: ABC trans... 60 2e-08
>gnl|LJGI|TC63599
Length = 1208
Score = 1013 bits (511), Expect = 0.0
Identities = 547/565 (96%)
Strand = Plus / Plus
Query: 1 atggctcccatctcaaaattcttttctttctttttcttaacaacccttttactgtccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggctcccatctcaaaattcttttctttctttttcttaacaacccttttactgtccctg 106
Query: 61 cagattaatgccagagacagccagttcttcagcaaagtcacccatgtnnnnnnnnnnnnn 120
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 cagattaatgccagagacagccagttcttcagcaaagtcacccatgtcaacaacaacaac 166
Query: 121 nnnnntgtcaaagagacagagtttcccaacaacaatgaagtaccggtaaacaagccagag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aacaatgtcaaagagacagagtttcccaacaacaatgaagtaccggtaaacaagccagag 226
Query: 181 caacaaccagtcttcaccccagagactgaaaacagctatggcctttatggccatgagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 caacaaccagtcttcaccccagagactgaaaacagctatggcctttatggccatgagtct 286
Query: 241 ggtctgcaccctcccaccaccaccaccacttacctgccatataaaacaactccttctaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ggtctgcaccctcccaccaccaccaccacttacctgccatataaaacaactccttctaag 346
Query: 301 gaggatcacaccaccaccaagaatttcaacaacaattacaacaactaccagaaggatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaggatcacaccaccaccaagaatttcaacaacaattacaacaactaccagaaggatgat 406
Query: 361 ttctttaacaccaaccaaaatgatcaactcagtgacacgagattcataggaaactctcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttctttaacaccaaccaaaatgatcaactcagtgacacgagattcataggaaactctcac 466
Query: 421 agcagcagcaacaacaacaattactactacaacaacaagaatgcttatgagggtaaccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agcagcagcaacaacaacaattactactacaacaacaagaatgcttatgagggtaaccaa 526
Query: 481 aatgaattgagcaacacaaagttcacagaaggaggaaacaagtacaaccccagggaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aatgaattgagcaacacaaagttcacagaaggaggaaacaagtacaaccccagggaaaat 586
Query: 541 cagaactacaaccagaagtttttct 565
|||||||||||||||||||||||||
Sbjct: 587 cagaactacaaccagaagtttttct 611
Score = 523 bits (264), Expect = e-148
Identities = 264/264 (100%)
Strand = Plus / Plus
Query: 631 gaaaagggtgcagaggtgcaagggatgagtgacactaggtttatggagggtggaaaatac 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gaaaagggtgcagaggtgcaagggatgagtgacactaggtttatggagggtggaaaatac 736
Query: 691 ttctacaatgttaactctgagaatgagaagtacaacccaacaggctatggtggtgaatca 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttctacaatgttaactctgagaatgagaagtacaacccaacaggctatggtggtgaatca 796
Query: 751 tcaactagaggagttaactctgagaattggtacaacaacaagggttactttggtaacaac 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tcaactagaggagttaactctgagaattggtacaacaacaagggttactttggtaacaac 856
Query: 811 aacaatgagaacaagaactccatggaaggttacaagaaccaggaggagtttgaagatgac 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 aacaatgagaacaagaactccatggaaggttacaagaaccaggaggagtttgaagatgac 916
Query: 871 caagatgttgatttcgagccctga 894
||||||||||||||||||||||||
Sbjct: 917 caagatgttgatttcgagccctga 940
>gnl|LJGI|GO007877 weakly similar to UniRef100_Q41725 Cluster: TED3; n=1; Zinnia
elegans|Rep: TED3 - Zinnia elegans (Zinnia), partial
(9%)
Length = 566
Score = 523 bits (264), Expect = e-148
Identities = 264/264 (100%)
Strand = Plus / Plus
Query: 631 gaaaagggtgcagaggtgcaagggatgagtgacactaggtttatggagggtggaaaatac 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 gaaaagggtgcagaggtgcaagggatgagtgacactaggtttatggagggtggaaaatac 163
Query: 691 ttctacaatgttaactctgagaatgagaagtacaacccaacaggctatggtggtgaatca 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ttctacaatgttaactctgagaatgagaagtacaacccaacaggctatggtggtgaatca 223
Query: 751 tcaactagaggagttaactctgagaattggtacaacaacaagggttactttggtaacaac 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tcaactagaggagttaactctgagaattggtacaacaacaagggttactttggtaacaac 283
Query: 811 aacaatgagaacaagaactccatggaaggttacaagaaccaggaggagtttgaagatgac 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aacaatgagaacaagaactccatggaaggttacaagaaccaggaggagtttgaagatgac 343
Query: 871 caagatgttgatttcgagccctga 894
||||||||||||||||||||||||
Sbjct: 344 caagatgttgatttcgagccctga 367
Score = 145 bits (73), Expect = 5e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 270 ttacctgccatataaaacaactccttctaaggaggatcacaccaccaccaagaatttcaa 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttacctgccatataaaacaactccttctaaggaggatcacaccaccaccaagaatttcaa 60
Query: 330 caacaattacaac 342
|||||||||||||
Sbjct: 61 caacaattacaac 73
>gnl|LJGI|BW598956
Length = 459
Score = 337 bits (170), Expect = 7e-92
Identities = 224/242 (92%)
Strand = Plus / Plus
Query: 631 gaaaagggtgcagaggtgcaagggatgagtgacactaggtttatggagggtggaaaatac 690
|||||||||||| ||||||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 218 gaaaagggtgcataggtgcaagggatgattgactctaggattatggagggtggaaaatac 277
Query: 691 ttctacaatgttaactctgagaatgagaagtacaacccaacaggctatggtggtgaatca 750
||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||
Sbjct: 278 ctctacaatgttaactctcataatgagaagtacaacccaacatgctatggtggtgaatca 337
Query: 751 tcaactagaggagttaactctgagaattggtacaacaacaagggttactttggtaacaac 810
||||||| |||||| |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 338 tcaactaaaggagtaaactctgaaaattggtacaacaacgagggttactttggtaacaac 397
Query: 811 aacaatgagaacaagaactccatggaaggttacaagaaccaggaggagtttgaagatgac 870
||| |||| |||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct: 398 aacgatgataacaagaactccttggaaggttccctgaaccaggaggagtttgaagatgac 457
Query: 871 ca 872
||
Sbjct: 458 ca 459
Score = 91.7 bits (46), Expect = 7e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 413 actctcacagcagcagcaacaacaacaattactactacaacaacaagaatgcttatgagg 472
||||||||||||||| | |||| |||||||||||||| |||| | ||||||||||||
Sbjct: 1 actctcacagcagcatccacaagcacaattactactacggcaacgggtatgcttatgagg 60
Query: 473 gtaaccaaaatgaattgagcaacaca 498
||||||||||||| ||||||||||||
Sbjct: 61 gtaaccaaaatgagttgagcaacaca 86
>gnl|LJGI|BP046165 weakly similar to UniRef100_Q7XDI5 Cluster: RNA recognition motif
family protein, expressed; n=3; Oryza sativa|Rep: RNA
recognition motif family protein, expressed - Oryza
sativa subsp. japonica (Rice), partial (5%)
Length = 494
Score = 149 bits (75), Expect = 3e-35
Identities = 102/111 (91%)
Strand = Plus / Minus
Query: 784 aacaacaagggttactttggtaacaacaacaatgagaacaagaactccatggaaggttac 843
|||||| ||||||||||||||||| || || |||||||| |||||||| |||||||||||
Sbjct: 267 aacaaccagggttactttggtaaccaccaccatgagaaccagaactccctggaaggttac 208
Query: 844 aagaaccaggaggagtttgaagatgaccaagatgttgatttcgagccctga 894
|||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 207 cagaacccggaggagtttgaagatgacccagatgttgatttcgagccctga 157
Score = 79.8 bits (40), Expect = 3e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 851 aggaggagtttgaagatgaccaagatgttgatttcgagccctga 894
||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 494 aggaggagtttgaagatgacccagatgttgatttcgagccctga 451
>gnl|LJGI|BW597966
Length = 458
Score = 103 bits (52), Expect = 2e-21
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 820 aacaagaactccatggaaggttacaagaaccaggaggagtttgaagatgaccaagatgtt 879
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 395 aacaagaactccctggaaggttacaagaaccaaaaggagtttgaagatgaccaagatgtt 454
Query: 880 gatt 883
||||
Sbjct: 455 gatt 458
>gnl|LJGI|AV776530 similar to UniRef100_Q4R945 Cluster: Dual specificity protein
kinase TTK; n=1; Macaca fascicularis|Rep: Dual
specificity, partial (1%)
Length = 393
Score = 95.6 bits (48), Expect = 5e-19
Identities = 172/195 (88%), Gaps = 14/195 (7%)
Strand = Plus / Minus
Query: 714 tgagaagtacaa-cccaacaggcta-tggtggtgaatcatca-actagaggagttaa-ct 769
|||||||||||| ||| || ||||| |||||||||||||||| | |||||||||||| ||
Sbjct: 393 tgagaagtacaatccccaccggctactggtggtgaatcatcacattagaggagttaagct 334
Query: 770 ctgagaatt-ggtacaa-caaca-agggtta-ctttggtaacaacaaca-atgagaa-ca 823
||||||||| ||||||| |||| ||||||| ||||||||||||| ||| ||||||| |
Sbjct: 333 ctgagaatttggtacaatcaacccagggttagctttggtaacaaccacacatgagaagcg 274
Query: 824 agaac-tccatggaaggttacaagaacc-aggaggagtttgaagatgaccaaga-tg-tt 879
||||| |||||||||||||| |||||| ||||||||||||||||||||| ||| || ||
Sbjct: 273 agaacctccatggaaggttancagaacccaggaggagtttgaagatgacccagactgctt 214
Query: 880 gatttcgagccctga 894
|||||||||||||||
Sbjct: 213 gatttcgagccctga 199
>gnl|LJGI|TC64379 similar to UniRef100_Q01197 Cluster: Protein E6; n=1; Gossypium
hirsutum|Rep: Protein E6 - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (29%)
Length = 1176
Score = 81.8 bits (41), Expect = 7e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 168 aaacaagccagagcaacaaccagtcttcaccccagagactgaaaacagctatggccttta 227
||||||||||||||||||||||| |||| ||| || |||||||||||||||||| | ||
Sbjct: 222 aaacaagccagagcaacaaccagctttcatccctgaaactgaaaacagctatggcttata 281
Query: 228 tggccatga 236
|||||||||
Sbjct: 282 tggccatga 290
Score = 79.8 bits (40), Expect = 3e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 648 gcaagggatgagtgacactaggtttatggagggtggaaaatacttcta 695
|||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 711 gcaagggatgagtgacacaaggtttttggagggtggaaaatacttcta 758
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 69 tgccagagacagccagttcttcagcaaagtcacccat 105
||||||||| ||||| |||||||||||||||||||||
Sbjct: 120 tgccagagaaagccaattcttcagcaaagtcacccat 156
Score = 52.0 bits (26), Expect = 6e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 840 ttacaagaaccaggaggagtttgaagatga 869
|||| |||||||||||||||||||||||||
Sbjct: 879 ttaccagaaccaggaggagtttgaagatga 908
>gnl|LJGI|AV775816 similar to UniRef100_Q4ITW2 Cluster: ABC transporter, transmembrane
region:ABC transporter; n=1; Azotobacter vinelandii
AvOP|Rep: ABC transporter, transmembrane region:ABC
transporter - Azotobacter vinelandii AvOP, partial (3%)
Length = 389
Score = 60.0 bits (30), Expect = 2e-08
Identities = 58/65 (89%), Gaps = 3/65 (4%)
Strand = Plus / Minus
Query: 833 tggaaggttacaagaacca--ggaggagtttgaagatgaccaaga-tgttgatttcgagc 889
||||||||||| |||||| |||||||||||||||||||| ||| | ||||||||||||
Sbjct: 307 tggaaggttaccagaacccacggaggagtttgaagatgacccagactcttgatttcgagc 248
Query: 890 cctga 894
|||||
Sbjct: 247 cctga 243