Miyakogusa Predicted Gene
- Lj4g3v0473340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0473340.1 Non Chatacterized Hit- tr|I3SNA5|I3SNA5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,seg,NULL;
no description,Nucleic acid-binding, OB-fold; Nucleic acid-binding
proteins,Nucleic acid-b,CUFF.47358.1
(468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58739 similar to UniRef100_A7QPS6 Cluster: Chromosome... 928 0.0
gnl|LJGI|TC79972 similar to UniRef100_A7PJ85 Cluster: Chromosome... 543 e-154
gnl|LJGI|TC61879 similar to UniRef100_A7QPS6 Cluster: Chromosome... 317 3e-86
gnl|LJGI|GO015241 similar to UniRef100_A7QPS6 Cluster: Chromosom... 283 5e-76
gnl|LJGI|TC64117 92 4e-18
>gnl|LJGI|TC58739 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 842
Score = 928 bits (468), Expect = 0.0
Identities = 468/468 (100%)
Strand = Plus / Plus
Query: 1 atggcttcaacgactaagcaagaaggcactggtggcggtggcggtagcaccggcggcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atggcttcaacgactaagcaagaaggcactggtggcggtggcggtagcaccggcggcgac 128
Query: 61 aaaccggcgaagagaaagcccgttttcaccaaggtggatcagctgaaacctggaaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 aaaccggcgaagagaaagcccgttttcaccaaggtggatcagctgaaacctggaaccaac 188
Query: 121 ggtcacaccctggtggctaaggtgttgtcttctgacaccgttttgcagaagggacgaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ggtcacaccctggtggctaaggtgttgtcttctgacaccgttttgcagaagggacgaccc 248
Query: 181 tcttcttctcagaaccttcgccccactctcatcgctgagtctctcatcggcgatgaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tcttcttctcagaaccttcgccccactctcatcgctgagtctctcatcggcgatgaaacc 308
Query: 241 ggcgccatcattttcaccgctcgcaacgaacaagttgagttgatgaagcctgggaacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggcgccatcattttcaccgctcgcaacgaacaagttgagttgatgaagcctgggaacaca 368
Query: 301 gtgattcttcgtaatgcaaagattgacatgtttaagggatcgatgaggttggctgttgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtgattcttcgtaatgcaaagattgacatgtttaagggatcgatgaggttggctgttgac 428
Query: 361 aaatggggccgcattgaggttactgaacctgcaaaattcgaagttaaagaggataacaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaatggggccgcattgaggttactgaacctgcaaaattcgaagttaaagaggataacaac 488
Query: 421 ctgtctctggtcgaatatgaattggttaacgtggttgaggaatgattc 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctgtctctggtcgaatatgaattggttaacgtggttgaggaatgattc 536
>gnl|LJGI|TC79972 similar to UniRef100_A7PJ85 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 431
Score = 543 bits (274), Expect = e-154
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 atggcttcaacgactaagcaagaaggcactggtggcggtggcggtagcaccggcggcgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atggcttcaacgactaagcaagaaggcactggtggcggtggcggtagcaccggcggcgac 169
Query: 61 aaaccggcgaagagaaagcccgttttcaccaaggtggatcagctgaaacctggaaccaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aaaccggcgaagagaaagcccgttttcaccaaggtggatcagctgaaacctggaaccaac 229
Query: 121 ggtcacaccctggtggctaaggtgttgtcttctgacaccgttttgcagaagggacgaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ggtcacaccctggtggctaaggtgttgtcttctgacaccgttttgcagaagggacgaccc 289
Query: 181 tcttcttctcagaaccttcgccccactctcatcgctgagtctctcatcggcgatgaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tcttcttctcagaaccttcgccccactctcatcgctgagtctctcatcggcgatgaaacc 349
Query: 241 ggcgccatcattttcaccgctcgcaacgaacaag 274
||||||||||||||||||||||||||||||||||
Sbjct: 350 ggcgccatcattttcaccgctcgcaacgaacaag 383
>gnl|LJGI|TC61879 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 704
Score = 317 bits (160), Expect = 3e-86
Identities = 355/420 (84%), Gaps = 15/420 (3%)
Strand = Plus / Plus
Query: 59 acaaaccggcgaagagaaagcccgttttcaccaaggtggatcagctgaaacctggaacca 118
|||||||||||||||||||||| || |||||||| ||||||||||| ||||| |||||||
Sbjct: 68 acaaaccggcgaagagaaagcctgtgttcaccaaagtggatcagctcaaaccaggaacca 127
Query: 119 acggtcacaccctggtggctaaggtgttgtcttctgacaccgtttt----------gcag 168
|||||||||| ||||| |||||||| ||||| || |||||||| | ||||
Sbjct: 128 acggtcacactctggtcgctaaggtcttgtcctccgacaccgtccttcacaaaggagcag 187
Query: 169 aagg--gacgaccctcttcttct---cagaaccttcgccccactctcatcgctgagtctc 223
||| || | | ||||||||| || ||| |||| ||||| ||||||| |||| |
Sbjct: 188 gaggaggagggtcttcttcttcttcccaaaacattcgtcccaccgtcatcgccgagtgcc 247
Query: 224 tcatcggcgatgaaaccggcgccatcattttcaccgctcgcaacgaacaagttgagttga 283
||||||| ||||| |||| |||| |||| |||||||||||||||||||||||||||||||
Sbjct: 248 tcatcggtgatgacaccgccgccgtcatcttcaccgctcgcaacgaacaagttgagttga 307
Query: 284 tgaagcctgggaacacagtgattcttcgtaatgcaaagattgacatgtttaagggatcga 343
|||||||||| | ||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct: 308 tgaagcctggaactacagtaattattcgtaatgcaaagattgacatgtttaagggatcaa 367
Query: 344 tgaggttggctgttgacaaatggggccgcattgaggttactgaacctgcaaaattcgaag 403
| ||| | ||||||||||||||||| |||||||| || |||||||||||||| |||| ||
Sbjct: 368 taaggcttgctgttgacaaatgggggcgcattgaagtcactgaacctgcaaatttcgtag 427
Query: 404 ttaaagaggataacaacctgtctctggtcgaatatgaattggttaacgtggttgaggaat 463
|||||||||||| |||| | |||| |||||||||||||||||| ||||||||||| ||||
Sbjct: 428 ttaaagaggataccaacttatctcaggtcgaatatgaattggtgaacgtggttgaagaat 487
>gnl|LJGI|GO015241 similar to UniRef100_A7QPS6 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 693
Score = 283 bits (143), Expect = 5e-76
Identities = 248/283 (87%)
Strand = Plus / Minus
Query: 181 tcttcttctcagaaccttcgccccactctcatcgctgagtctctcatcggcgatgaaacc 240
|||||||| || ||| |||| ||||| ||||||| |||| |||||||| ||||| |||
Sbjct: 580 tcttcttcccaaaacattcgtcccaccgtcatcgccgagtgcctcatcggtgatgacacc 521
Query: 241 ggcgccatcattttcaccgctcgcaacgaacaagttgagttgatgaagcctgggaacaca 300
| | || |||| ||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 520 gccaccgtcatcttcaccgctcgcaacgaacaagttgagttgatgaagcctggaactaca 461
Query: 301 gtgattcttcgtaatgcaaagattgacatgtttaagggatcgatgaggttggctgttgac 360
|| ||| |||||||||||||||||||||||||||||||||| || ||| | |||||||||
Sbjct: 460 gtaattattcgtaatgcaaagattgacatgtttaagggatcaataaggcttgctgttgac 401
Query: 361 aaatggggccgcattgaggttactgaacctgcaaaattcgaagttaaagaggataacaac 420
|||||||| |||||||| || |||||||||||||| |||| |||||||||||||| ||||
Sbjct: 400 aaatgggggcgcattgaagtcactgaacctgcaaatttcgtagttaaagaggataccaac 341
Query: 421 ctgtctctggtcgaatatgaattggttaacgtggttgaggaat 463
| |||| |||||||||||||||||| ||||||||||| ||||
Sbjct: 340 ttatctcaggtcgaatatgaattggtgaacgtggttgaagaat 298
>gnl|LJGI|TC64117
Length = 759
Score = 91.7 bits (46), Expect = 4e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 310 cgtaatgcaaagattgacatgtttaagggatcgatgaggttggctgttgacaaatggggc 369
||||| || |||||||||||||| ||||||||||||||| | || ||||| | |||||||
Sbjct: 355 cgtaacgccaagattgacatgttcaagggatcgatgaggctagcagttgatagatggggc 414
Query: 370 cgcattgaggttactgaacctgcaaaattcgaagttaaagaggataacaa 419
|| |||||||| || |||||||| || || ||||| |||||||| |||||
Sbjct: 415 cgtattgaggtcacggaacctgccaattttgaagtgaaagaggagaacaa 464