Miyakogusa Predicted Gene

Lj4g3v0462780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0462780.1 Non Chatacterized Hit- tr|K4DH67|K4DH67_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,52.48,4e-18,DUF1764,Protein of unknown function DUF1764,
eukaryotic; seg,NULL,CUFF.47314.1
         (367 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74401                                                      172   1e-42

>gnl|LJGI|TC74401 
          Length = 1054

 Score =  172 bits (87), Expect = 1e-42
 Identities = 126/139 (90%)
 Strand = Plus / Plus

                                                                       
Query: 229 tttgtagaccggccttctcggccaagaaagaaaacagaggatggactttccttatattct 288
           ||||||||||| ||||| |||||||||||||||||  |||||||||||||| | ||| ||
Sbjct: 352 tttgtagaccgaccttcgcggccaagaaagaaaacgcaggatggactttccatttatact 411

                                                                       
Query: 289 gaggaggagttaggtcttaataaacaggatgctggtggtacccctctctgtccattcgat 348
           ||||||||||||||| |||||||||||||||||||  ||||||| ||||| |||||||||
Sbjct: 412 gaggaggagttaggtattaataaacaggatgctggaagtaccccactctgcccattcgat 471

                              
Query: 349 tgctcttgttgcttttgat 367
           ||||||||||| |||||||
Sbjct: 472 tgctcttgttgtttttgat 490



 Score = 97.6 bits (49), Expect = 5e-20
 Identities = 117/139 (84%), Gaps = 3/139 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacaaagaagagttctaagaagaccccaagtcagttgcaagagaatattgttgtggaa 60
           ||||| ||||||||||| || | |||||| |||  |||||||||  ||||||||||||||
Sbjct: 109 atgacgaagaagagttcgaaaacgacccctagttggttgcaagaacatattgttgtggaa 168

                                                                       
Query: 61  gaggaaaaaccttcagctgtaccaaagaaagcaagtaatgaaattgatgaaatatttgct 120
           |||| |||||| ||  |||||  || |   ||| ||||||||||||||||||||||||||
Sbjct: 169 gaggcaaaaccctcgtctgtaataagg---gcaggtaatgaaattgatgaaatatttgct 225

                              
Query: 121 ggaaaaaagaggaagaaag 139
           || ||||||||||| ||||
Sbjct: 226 ggtaaaaagaggaaaaaag 244