Miyakogusa Predicted Gene
- Lj4g3v0462750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0462750.1 tr|I3S397|I3S397_LOTJA 40S ribosomal protein S6
OS=Lotus japonicus PE=2 SV=1,98.47,0,Ribosomal_S6e,Ribosomal protein
S6e; seg,NULL; 40S RIBOSOMAL PROTEIN S6,Ribosomal protein S6e;
RIBOS,CUFF.47375.1
(591 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59887 homologue to UniRef100_Q6SPR3 Cluster: Ribosoma... 1172 0.0
gnl|LJGI|TC62657 homologue to UniRef100_Q6SPR3 Cluster: Ribosoma... 648 0.0
gnl|LJGI|TC57190 homologue to UniRef100_Q6SPR3 Cluster: Ribosoma... 648 0.0
gnl|LJGI|TC65794 homologue to UniRef100_Q6SPR3 Cluster: Ribosoma... 527 e-149
>gnl|LJGI|TC59887 homologue to UniRef100_Q6SPR3 Cluster: Ribosomal protein S6; n=1;
Glycine max|Rep: Ribosomal protein S6 - Glycine max
(Soybean), complete
Length = 1151
Score = 1172 bits (591), Expect = 0.0
Identities = 591/591 (100%)
Strand = Plus / Plus
Query: 1 atgaagtttaacattgcgaatcccaccactgggtgccagaagaagctcgaaatcgatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgaagtttaacattgcgaatcccaccactgggtgccagaagaagctcgaaatcgatgac 137
Query: 61 gacctcaaacttcgtgcattttgggacaagaggatctcacaggaggttcttggtgatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gacctcaaacttcgtgcattttgggacaagaggatctcacaggaggttcttggtgatgct 197
Query: 121 cttggtgaggaatttaagggctatgttttcaagattactggtgggtgtgacaagcaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cttggtgaggaatttaagggctatgttttcaagattactggtgggtgtgacaagcaagga 257
Query: 181 ttcccaatgaagcagggtgtgctgacccctggtcgtgtccgactcttgcttcacagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcccaatgaagcagggtgtgctgacccctggtcgtgtccgactcttgcttcacagagga 317
Query: 241 actccttgtttccgtggatacggaaggcgcaatggagagcgcagaaggaagtctgtgcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 actccttgtttccgtggatacggaaggcgcaatggagagcgcagaaggaagtctgtgcgt 377
Query: 301 ggatgcattgtcagccctgacctctctgttttgaacttggtgattgtgaagaaaggtgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggatgcattgtcagccctgacctctctgttttgaacttggtgattgtgaagaaaggtgat 437
Query: 361 aatgatttacctggtcttactgatgttgagaaaccaaggatgaggggtccaaagagagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aatgatttacctggtcttactgatgttgagaaaccaaggatgaggggtccaaagagagca 497
Query: 421 tccaaaattcgcaagctgttcaacctttcaaaggatgatgatgtgagaaagtatgttaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tccaaaattcgcaagctgttcaacctttcaaaggatgatgatgtgagaaagtatgttaac 557
Query: 481 acataccgccgaaacttcacaaccaaaaatgggaaaaaggtaagcaaagctcccaagatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 acataccgccgaaacttcacaaccaaaaatgggaaaaaggtaagcaaagctcccaagatt 617
Query: 541 caacgtctggtcactcctttgacactccaaaggaagcgagcaagaattgca 591
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 caacgtctggtcactcctttgacactccaaaggaagcgagcaagaattgca 668
>gnl|LJGI|TC62657 homologue to UniRef100_Q6SPR3 Cluster: Ribosomal protein S6; n=1;
Glycine max|Rep: Ribosomal protein S6 - Glycine max
(Soybean), partial (83%)
Length = 688
Score = 648 bits (327), Expect = 0.0
Identities = 525/591 (88%)
Strand = Plus / Plus
Query: 1 atgaagtttaacattgcgaatcccaccactgggtgccagaagaagctcgaaatcgatgac 60
|||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgaagttcaacatcgcgaatccaaccactgggtgccagaagaagctcgaaatcgatgac 126
Query: 61 gacctcaaacttcgtgcattttgggacaagaggatctcacaggaggttcttggtgatgct 120
|||||||| ||||| || || ||||||||||||||||| || |||||||| |||||||||
Sbjct: 127 gacctcaagcttcgcgctttctgggacaagaggatctcgcaagaggttctcggtgatgct 186
Query: 121 cttggtgaggaatttaagggctatgttttcaagattactggtgggtgtgacaagcaagga 180
| || ||||| || ||||||||||| ||||| || ||||| ||||| |||||||||||
Sbjct: 187 ttgggcgaggagttcaagggctatgtcttcaaaatcactggagggtgcgacaagcaaggt 246
Query: 181 ttcccaatgaagcagggtgtgctgacccctggtcgtgtccgactcttgcttcacagagga 240
|| |||||||||||||||||| |||||||||| ||||| || |||||||| ||| |||||
Sbjct: 247 tttccaatgaagcagggtgtgttgacccctggccgtgttcgcctcttgctccaccgagga 306
Query: 241 actccttgtttccgtggatacggaaggcgcaatggagagcgcagaaggaagtctgtgcgt 300
|||||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||
Sbjct: 307 actccttgcttccgtggatatggaaggcgtaatggagagcgcaggagaaagtctgtacgt 366
Query: 301 ggatgcattgtcagccctgacctctctgttttgaacttggtgattgtgaagaaaggtgat 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 367 ggatgcattgtcagccctgacctctctgttctgaacttggtgattgtgaagaagggtgac 426
Query: 361 aatgatttacctggtcttactgatgttgagaaaccaaggatgaggggtccaaagagagca 420
|||||||||||||| | |||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 427 aatgatttacctggcttgactgatgttgagaagccaaggatgaggggtcccaagagggct 486
Query: 421 tccaaaattcgcaagctgttcaacctttcaaaggatgatgatgtgagaaagtatgttaac 480
|| ||||| |||||||||||||| || || ||||||||||||||||| |||||||| |||
Sbjct: 487 tctaaaatccgcaagctgttcaatctgtctaaggatgatgatgtgaggaagtatgtcaac 546
Query: 481 acataccgccgaaacttcacaaccaaaaatgggaaaaaggtaagcaaagctcccaagatt 540
|||||||| ||| |||||||||||| |||||||||||| ||||||||||| ||||||
Sbjct: 547 acataccgtagaacattcacaaccaaagctgggaaaaaggtgagcaaagctcctaagatt 606
Query: 541 caacgtctggtcactcctttgacactccaaaggaagcgagcaagaattgca 591
|| || ||||||||||| ||||||| ||||||||| | ||||||||||||
Sbjct: 607 cagcgattggtcactcctctgacacttcaaaggaagagggcaagaattgca 657
>gnl|LJGI|TC57190 homologue to UniRef100_Q6SPR3 Cluster: Ribosomal protein S6; n=1;
Glycine max|Rep: Ribosomal protein S6 - Glycine max
(Soybean), complete
Length = 1023
Score = 648 bits (327), Expect = 0.0
Identities = 525/591 (88%)
Strand = Plus / Plus
Query: 1 atgaagtttaacattgcgaatcccaccactgggtgccagaagaagctcgaaatcgatgac 60
|||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 45 atgaagttcaacatcgcgaatccaaccactgggtgccagaagaagctcgaaatcgatgat 104
Query: 61 gacctcaaacttcgtgcattttgggacaagaggatctcacaggaggttcttggtgatgct 120
|||||||| |||||||| || ||||||||||||||||| || |||||||| |||||||||
Sbjct: 105 gacctcaagcttcgtgctttctgggacaagaggatctcgcaagaggttctcggtgatgct 164
Query: 121 cttggtgaggaatttaagggctatgttttcaagattactggtgggtgtgacaagcaagga 180
| || ||||| || ||||||||||| ||||| || ||||| ||||| |||||||||||
Sbjct: 165 ttgggcgaggagttcaagggctatgtcttcaaaatcactggagggtgcgacaagcaaggt 224
Query: 181 ttcccaatgaagcagggtgtgctgacccctggtcgtgtccgactcttgcttcacagagga 240
|| |||||||||||||||||| |||||||||| ||||| || |||||||| ||| |||||
Sbjct: 225 tttccaatgaagcagggtgtgttgacccctggccgtgttcgcctcttgctccaccgagga 284
Query: 241 actccttgtttccgtggatacggaaggcgcaatggagagcgcagaaggaagtctgtgcgt 300
|||||||| ||||||||||| |||||||| |||||||||||||| || |||||||| |||
Sbjct: 285 actccttgcttccgtggatatggaaggcgtaatggagagcgcaggagaaagtctgtacgt 344
Query: 301 ggatgcattgtcagccctgacctctctgttttgaacttggtgattgtgaagaaaggtgat 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 345 ggatgcattgtcagccctgacctctctgttctgaacttggtgattgtgaagaagggtgac 404
Query: 361 aatgatttacctggtcttactgatgttgagaaaccaaggatgaggggtccaaagagagca 420
|||||||||||||| | |||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 405 aatgatttacctggcttgactgatgttgagaagccaaggatgaggggtcccaagagggct 464
Query: 421 tccaaaattcgcaagctgttcaacctttcaaaggatgatgatgtgagaaagtatgttaac 480
|| ||||| |||||||||||||| || || ||||||||||||||||| |||||||| |||
Sbjct: 465 tctaaaatccgcaagctgttcaatctgtctaaggatgatgatgtgaggaagtatgtcaac 524
Query: 481 acataccgccgaaacttcacaaccaaaaatgggaaaaaggtaagcaaagctcccaagatt 540
|||||||| ||| |||||||||||| |||||||||||| ||||||||||| ||||||
Sbjct: 525 acataccgtagaacattcacaaccaaagctgggaaaaaggtgagcaaagctcctaagatt 584
Query: 541 caacgtctggtcactcctttgacactccaaaggaagcgagcaagaattgca 591
|| || ||||||||||| ||||||| ||||||||| | ||||||||||||
Sbjct: 585 cagcgattggtcactcctctgacacttcaaaggaagagggcaagaattgca 635
>gnl|LJGI|TC65794 homologue to UniRef100_Q6SPR3 Cluster: Ribosomal protein S6; n=1;
Glycine max|Rep: Ribosomal protein S6 - Glycine max
(Soybean), complete
Length = 1016
Score = 527 bits (266), Expect = e-149
Identities = 509/590 (86%)
Strand = Plus / Plus
Query: 1 atgaagtttaacattgcgaatcccaccactgggtgccagaagaagctcgaaatcgatgac 60
|||||||| |||||||| ||||| |||||||||||||||||||||||||| || || ||
Sbjct: 92 atgaagttcaacattgcaaatccaaccactgggtgccagaagaagctcgagattgacgat 151
Query: 61 gacctcaaacttcgtgcattttgggacaagaggatctcacaggaggttcttggtgatgct 120
|| || ||||| || |||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 152 gatctgaaactacgagcattttgggacaagaggatctcacaggaggtcattggagatgca 211
Query: 121 cttggtgaggaatttaagggctatgttttcaagattactggtgggtgtgacaagcaagga 180
||||||||||||||||| |||||||| ||||| || ||||| || |||||||| |||||
Sbjct: 212 cttggtgaggaatttaaaggctatgtcttcaaaatcactggaggttgtgacaaacaaggt 271
Query: 181 ttcccaatgaagcagggtgtgctgacccctggtcgtgtccgactcttgcttcacagagga 240
||||||||||||||||| ||||||||||| |||||||| || |||||||||||||| ||
Sbjct: 272 ttcccaatgaagcagggagtgctgaccccaggtcgtgttcgtctcttgcttcacaggggg 331
Query: 241 actccttgtttccgtggatacggaaggcgcaatggagagcgcagaaggaagtctgtgcgt 300
|| |||||||| |||||||| |||||||| |||||||||||||| ||||| ||||| |||
Sbjct: 332 acaccttgttttcgtggatatggaaggcgtaatggagagcgcaggaggaaatctgttcgt 391
Query: 301 ggatgcattgtcagccctgacctctctgttttgaacttggtgattgtgaagaaaggtgat 360
|| || |||||||| || || |||||||||||||||||||| ||||||||||| |||||
Sbjct: 392 gggtgtattgtcagtccagatctctctgttttgaacttggtcattgtgaagaagggtgag 451
Query: 361 aatgatttacctggtcttactgatgttgagaaaccaaggatgaggggtccaaagagagca 420
||||||||||| ||||| || || |||||| || |||||||| |||||||||||||||
Sbjct: 452 aatgatttaccaggtctgaccgacactgagaagcctaggatgagaggtccaaagagagca 511
Query: 421 tccaaaattcgcaagctgttcaacctttcaaaggatgatgatgtgagaaagtatgttaac 480
|||||||| || |||||||||||||| || || || ||||||||||| |||||||| ||
Sbjct: 512 tccaaaatccgtaagctgttcaacctgtccaaagaggatgatgtgaggaagtatgtcaat 571
Query: 481 acataccgccgaaacttcacaaccaaaaatgggaaaaaggtaagcaaagctcccaagatt 540
|||||||| || | || ||||| ||| ||| |||||||| ||||||||||| |||||
Sbjct: 572 acataccgtcggacatttacaacaaaagctggtaaaaaggtgagcaaagctccgaagata 631
Query: 541 caacgtctggtcactcctttgacactccaaaggaagcgagcaagaattgc 590
||||| |||||||||||| | |||||||| || ||||| ||||| |||||
Sbjct: 632 caacgactggtcactcctcttacactccagagaaagcgcgcaaggattgc 681