Miyakogusa Predicted Gene
- Lj4g3v0462600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0462600.1 Non Chatacterized Hit- tr|I1KLL8|I1KLL8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,86.01,0,30S RIBOSOMAL
PROTEIN S5P,NULL; RIBOSOMAL S SUBUNIT,Ribosomal protein S5; seg,NULL;
rpsE_bact: ribos,CUFF.47321.1
(879 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58836 similar to UniRef100_A7QPU4 Cluster: Chromosome... 1419 0.0
gnl|LJGI|BP075469 similar to UniRef100_A7QPU4 Cluster: Chromosom... 345 3e-94
>gnl|LJGI|TC58836 similar to UniRef100_A7QPU4 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 1300
Score = 1419 bits (716), Expect = 0.0
Identities = 716/716 (100%)
Strand = Plus / Plus
Query: 164 aatgcaaacccaccgacgacattgacaccaccttcttcgacaccgcaaacccagaagaag 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aatgcaaacccaccgacgacattgacaccaccttcttcgacaccgcaaacccagaagaag 329
Query: 224 acctccccttcaacccaccagaaatccccgaaggcttcgtccctcctccttccatcgacg 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 acctccccttcaacccaccagaaatccccgaaggcttcgtccctcctccttccatcgacg 389
Query: 284 acggccccatcgaaaccgaggacgaaatcgccgccgcgtatgaggaaatctacggccctg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 acggccccatcgaaaccgaggacgaaatcgccgccgcgtatgaggaaatctacggccctg 449
Query: 344 cttacagcggagtgtcggttctgggtaatgacatccacgtgatggactcgaaggcgaaga 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cttacagcggagtgtcggttctgggtaatgacatccacgtgatggactcgaaggcgaaga 509
Query: 404 aggatactgggttcgggtcgggtgtgaagaaggagaaggtgagagatgggtttgaggaga 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aggatactgggttcgggtcgggtgtgaagaaggagaaggtgagagatgggtttgaggaga 569
Query: 464 gggtggttcaggtgaggaggatcaccaaggtggttaagggagggaagcagttgaagttca 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gggtggttcaggtgaggaggatcaccaaggtggttaagggagggaagcagttgaagttca 629
Query: 524 gggcggttgtggtcgtcggtgacaagaaaggtaatgtgggtgttggtgttggcaaggcca 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gggcggttgtggtcgtcggtgacaagaaaggtaatgtgggtgttggtgttggcaaggcca 689
Query: 584 aggaggttgtagcggcggttcagaaatctgctgtcaatgctaggaggaacattgtcagtg 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aggaggttgtagcggcggttcagaaatctgctgtcaatgctaggaggaacattgtcagtg 749
Query: 644 tgcctatgactaagtacttgactttcccacacagatctgatggagattatggagcggcaa 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tgcctatgactaagtacttgactttcccacacagatctgatggagattatggagcggcaa 809
Query: 704 aggtgatgcttagacctgcttctcctggtactggagttattgcaggtggggctgtgagaa 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 aggtgatgcttagacctgcttctcctggtactggagttattgcaggtggggctgtgagaa 869
Query: 764 ttgttcttgaaatggcaggtgttgagaatgctttgggaaagcaactaggaagtaataatg 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ttgttcttgaaatggcaggtgttgagaatgctttgggaaagcaactaggaagtaataatg 929
Query: 824 cactcaacaatgccagagcaactgttgttgctgtgcagaaaatgagacagttccgt 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 cactcaacaatgccagagcaactgttgttgctgtgcagaaaatgagacagttccgt 985
>gnl|LJGI|BP075469 similar to UniRef100_A7QPU4 Cluster: Chromosome chr10 scaffold_138,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 439
Score = 345 bits (174), Expect = 3e-94
Identities = 192/198 (96%)
Strand = Plus / Minus
Query: 680 ctgatggagattatggagcggcaaaggtgatgcttagacctgcttctcctggtactggag 739
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctgatggagattatggagcggccaaggtgatgcttagacctgcttctcctggtactggag 380
Query: 740 ttattgcaggtggggctgtgagaattgttcttgaaatggcaggtgttgagaatgctttgg 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttattgcaggtggggctgtgagaattgttcttgaaatggcaggtgttgagaatgctttgg 320
Query: 800 gaaagcaactaggaagtaataatgcactcaacaatgccagagcaactgttgttgctgtgc 859
||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||
Sbjct: 319 gaaagcaactaggaagtaataatgcactcccccatgccagagccactgttgttgctgtgc 260
Query: 860 agaaaatgagacagttcc 877
||| ||||||||||||||
Sbjct: 259 agacaatgagacagttcc 242