Miyakogusa Predicted Gene
- Lj4g3v0450850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0450850.1 Non Chatacterized Hit- tr|J3M2Q0|J3M2Q0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G3,67.86,6e-19,seg,NULL; Clathrin_lg_ch,Clathrin light chain;
coiled-coil,NULL; PROTEIN BINDING / PROTEIN TRANSPORT,CUFF.47233.1
(531 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73100 1027 0.0
gnl|LJGI|GO021776 904 0.0
gnl|LJGI|TC68868 773 0.0
gnl|LJGI|BP051001 628 e-180
gnl|LJGI|TC80838 426 e-119
gnl|LJGI|TC65486 301 2e-81
gnl|LJGI|TC75528 165 3e-40
gnl|LJGI|BW621229 127 8e-29
gnl|LJGI|TC67953 74 1e-12
>gnl|LJGI|TC73100
Length = 574
Score = 1027 bits (518), Expect = 0.0
Identities = 524/526 (99%)
Strand = Plus / Plus
Query: 1 atgtccttcgccgtcgacgacctcaacttcgacgccgcagacgacaccttctccggatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atgtccttcgccgtcgacgacctcaacttcgacgccgcagacgacaccttctccggatac 108
Query: 61 ggaggctactccagcttccccggcgacgatgcccccgtcgaacactcaacaacggcggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ggaggctactccagcttccccggcgacgatgcccccgtcgaacactcaacaacggcggca 168
Query: 121 ccagagtcgccggatatcttcggcttcagcgatccaaatccgaattactctcagtctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ccagagtcgccggatatcttcggcttcagcgatccaaatccgaattactctcagtctccc 228
Query: 181 tttgaaccagagcacgtagtggagaacggtgatgaaaacggctacgatgatggagttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tttgaaccagagcacgtagtggagaacggtgatgaaaacggctacgatgatggagttttc 288
Query: 241 gtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggttacgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggttacgct 348
Query: 301 cttcgggagtggcgccgtcaaaatgccattcagctagaggagaaggagaaaagggaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cttcgggagtggcgccgtcaaaatgccattcagctagaggagaaggagaaaagggaaaaa 408
Query: 361 gaaatgagactaaagattattgaggaagctgaggattataaggtggctttctatgagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaaatgagactaaagattattgaggaagctgaggattataaggtggctttctatgagaaa 468
Query: 421 aggaagcttaacgttgagtctaacaaggttcaaaacagagaaagggagaagttatactta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aggaagcttaacgttgagtctaacaaggttcaaaacagagaaagggagaagttatactta 528
Query: 481 gccaatcaggagaaattccacaaagaggctgacaaaaattactgga 526
|||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 529 gccaatcaagagaaattccacagagaggctgacaaaaattactgga 574
>gnl|LJGI|GO021776
Length = 551
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 35 ccgcagacgacaccttctccggatacggaggctactccagcttccccggcgacgatgccc 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ccgcagacgacaccttctccggatacggaggctactccagcttccccggcgacgatgccc 155
Query: 95 ccgtcgaacactcaacaacggcggcaccagagtcgccggatatcttcggcttcagcgatc 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ccgtcgaacactcaacaacggcggcaccagagtcgccggatatcttcggcttcagcgatc 215
Query: 155 caaatccgaattactctcagtctccctttgaaccagagcacgtagtggagaacggtgatg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 caaatccgaattactctcagtctccctttgaaccagagcacgtagtggagaacggtgatg 275
Query: 215 aaaacggctacgatgatggagttttcgtctccgacgggcctgtgcttccgccgcctggcg 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaaacggctacgatgatggagttttcgtctccgacgggcctgtgcttccgccgcctggcg 335
Query: 275 atatggagccggaggaaggttacgctcttcgggagtggcgccgtcaaaatgccattcagc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atatggagccggaggaaggttacgctcttcgggagtggcgccgtcaaaatgccattcagc 395
Query: 335 tagaggagaaggagaaaagggaaaaagaaatgagactaaagattattgaggaagctgagg 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tagaggagaaggagaaaagggaaaaagaaatgagactaaagattattgaggaagctgagg 455
Query: 395 attataaggtggctttctatgagaaaaggaagcttaacgttgagtctaacaaggttcaaa 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 attataaggtggctttctatgagaaaaggaagcttaacgttgagtctaacaaggttcaaa 515
Query: 455 acagagaaagggagaagttatacttagccaatcagg 490
||||||||||||||||||||||||||||||||||||
Sbjct: 516 acagagaaagggagaagttatacttagccaatcagg 551
>gnl|LJGI|TC68868
Length = 1121
Score = 773 bits (390), Expect = 0.0
Identities = 393/394 (99%)
Strand = Plus / Plus
Query: 138 cttcggcttcagcgatccaaatccgaattactctcagtctccctttgaaccagagcacgt 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 cttcggcttcagcgatccaaatccgaattactctcagtctccctttgaaccagagcacgt 173
Query: 198 agtggagaacggtgatgaaaacggctacgatgatggagttttcgtctccgacgggcctgt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 agtggagaacggtgatgaaaacggctacgatgatggagttttcgtctccgacgggcctgt 233
Query: 258 gcttccgccgcctggcgatatggagccggaggaaggttacgctcttcgggagtggcgccg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gcttccgccgcctggcgatatggagccggaggaaggttacgctcttcgggagtggcgccg 293
Query: 318 tcaaaatgccattcagctagaggagaaggagaaaagggaaaaagaaatgagactaaagat 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tcaaaatgccattcagctagaggagaaggagaaaagggaaaaagaaatgagactaaagat 353
Query: 378 tattgaggaagctgaggattataaggtggctttctatgagaaaaggaagcttaacgttga 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tattgaggaagctgaggattataaggtggctttctatgagaaaaggaagcttaacgttga 413
Query: 438 gtctaacaaggttcaaaacagagaaagggagaagttatacttagccaatcaggagaaatt 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gtctaacaaggttcaaaacagagaaagggagaagttatacttagccaatcaggagaaatt 473
Query: 498 ccacaaagaggctgacaaaaattactggaaagca 531
||||||||||||||||||||||||| ||||||||
Sbjct: 474 ccacaaagaggctgacaaaaattaccggaaagca 507
Score = 61.9 bits (31), Expect = 4e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 atgtccttcgccgtcgacgacctcaacttcg 31
|||||||||||||||||||||||||||||||
Sbjct: 88 atgtccttcgccgtcgacgacctcaacttcg 118
>gnl|LJGI|BP051001
Length = 565
Score = 628 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 1 atgtccttcgccgtcgacgacctcaacttcgacgccgcagacgacaccttctccggatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atgtccttcgccgtcgacgacctcaacttcgacgccgcagacgacaccttctccggatac 80
Query: 61 ggaggctactccagcttccccggcgacgatgcccccgtcgaacactcaacaacggcggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ggaggctactccagcttccccggcgacgatgcccccgtcgaacactcaacaacggcggca 140
Query: 121 ccagagtcgccggatatcttcggcttcagcgatccaaatccgaattactctcagtctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ccagagtcgccggatatcttcggcttcagcgatccaaatccgaattactctcagtctccc 200
Query: 181 tttgaaccagagcacgtagtggagaacggtgatgaaaacggctacgatgatggagttttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaaccagagcacgtagtggagaacggtgatgaaaacggctacgatgatggagttttc 260
Query: 241 gtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggttacgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggttacgct 320
Query: 301 cttcgggagtggcgccg 317
|||||||||||||||||
Sbjct: 321 cttcgggagtggcgccg 337
Score = 285 bits (144), Expect = 1e-76
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 317 gtcaaaatgccattcagctagaggagaaggagaaaagggaaaaagaaatgagactaaaga 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtcaaaatgccattcagctagaggagaaggagaaaagggaaaaagaaatgagactaaaga 481
Query: 377 ttattgaggaagctgaggattataaggtggctttctatgagaaaaggaagcttaacgttg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttattgaggaagctgaggattataaggtggctttctatgagaaaaggaagcttaacgttg 541
Query: 437 agtctaacaaggttcaaaacagag 460
||||||||||||||||||||||||
Sbjct: 542 agtctaacaaggttcaaaacagag 565
>gnl|LJGI|TC80838
Length = 791
Score = 426 bits (215), Expect = e-119
Identities = 215/215 (100%)
Strand = Plus / Plus
Query: 317 gtcaaaatgccattcagctagaggagaaggagaaaagggaaaaagaaatgagactaaaga 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gtcaaaatgccattcagctagaggagaaggagaaaagggaaaaagaaatgagactaaaga 173
Query: 377 ttattgaggaagctgaggattataaggtggctttctatgagaaaaggaagcttaacgttg 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ttattgaggaagctgaggattataaggtggctttctatgagaaaaggaagcttaacgttg 233
Query: 437 agtctaacaaggttcaaaacagagaaagggagaagttatacttagccaatcaggagaaat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 agtctaacaaggttcaaaacagagaaagggagaagttatacttagccaatcaggagaaat 293
Query: 497 tccacaaagaggctgacaaaaattactggaaagca 531
|||||||||||||||||||||||||||||||||||
Sbjct: 294 tccacaaagaggctgacaaaaattactggaaagca 328
Score = 165 bits (83), Expect = 3e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 236 ttttcgtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggtt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ttttcgtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggtt 63
Query: 296 acgctcttcgggagtggcgccgt 318
|||||||||||||||||||||||
Sbjct: 64 acgctcttcgggagtggcgccgt 86
>gnl|LJGI|TC65486
Length = 1362
Score = 301 bits (152), Expect = 2e-81
Identities = 245/276 (88%)
Strand = Plus / Plus
Query: 241 gtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggttacgct 300
|||||||| || || ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 388 gtctccgatggtccagtgcttccgccgcctggtgatatggagccggaagaaggttacgct 447
Query: 301 cttcgggagtggcgccgtcaaaatgccattcagctagaggagaaggagaaaagggaaaaa 360
||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 448 cttcgcgagtggcgccgtcaaaatgccatcttactagaggagaaggagaaaagagaaaaa 507
Query: 361 gaaatgagactaaagattattgaggaagctgaggattataaggtggctttctatgagaaa 420
|||||| || | ||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct: 508 gaaatgcgattgaagattattgaggaagctgaggagtacaaggttgctttctatgagaaa 567
Query: 421 aggaagcttaacgttgagtctaacaaggttcaaaacagagaaagggagaagttatactta 480
|||||||| || |||||| |||||||||||||||| |||||||||||| |||||| | |
Sbjct: 568 aggaagctaaatgttgagactaacaaggttcaaaatagagaaagggagcagttattcgtg 627
Query: 481 gccaatcaggagaaattccacaaagaggctgacaaa 516
|| ||||| ||||| || ||||| ||||| ||||||
Sbjct: 628 gctaatcaagagaagtttcacaaggaggcagacaaa 663
>gnl|LJGI|TC75528
Length = 538
Score = 165 bits (83), Expect = 3e-40
Identities = 125/139 (89%)
Strand = Plus / Plus
Query: 241 gtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggttacgct 300
|||||||| || || ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 400 gtctccgatggtccagtgcttccgccgcctggtgatatggagccggaagaaggttacgct 459
Query: 301 cttcgggagtggcgccgtcaaaatgccattcagctagaggagaaggagaaaagggaaaaa 360
||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 460 cttcgcgagtggcgccgtcaaaatgccatcttactagaggagaaggagaaaagagaaaaa 519
Query: 361 gaaatgagactaaagatta 379
|||||| || | |||||||
Sbjct: 520 gaaatgcgattgaagatta 538
>gnl|LJGI|BW621229
Length = 473
Score = 127 bits (64), Expect = 8e-29
Identities = 91/100 (91%)
Strand = Plus / Plus
Query: 356 aaaaagaaatgagactaaagattattgaggaagctgaggattataaggtggctttctatg 415
||||||||||| || | ||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 371 aaaaagaaatgcgattgaagattattgaggaagctgaggagtacaaggttgctttctatg 430
Query: 416 agaaaaggaagcttaacgttgagtctaacaaggttcaaaa 455
||||||||||||| || |||||| ||||||||||||||||
Sbjct: 431 agaaaaggaagctaaatgttgagactaacaaggttcaaaa 470
Score = 117 bits (59), Expect = 7e-26
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 241 gtctccgacgggcctgtgcttccgccgcctggcgatatggagccggaggaaggttacgct 300
|||||||| || || ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 292 gtctccgatggtccagtgcttccgccgcctggtgatatggagccggaagaaggttacgct 351
Query: 301 cttcgggagtggcgccgtcaaaa 323
||||| |||||||||||||||||
Sbjct: 352 cttcgcgagtggcgccgtcaaaa 374
>gnl|LJGI|TC67953
Length = 818
Score = 73.8 bits (37), Expect = 1e-12
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 454 aacagagaaagggagaagttatacttagccaatcaggagaaattccacaaagaggctgac 513
||||||||||| || ||| ||||||| || || || |||||||| |||||||| ||||||
Sbjct: 83 aacagagaaagagaaaagatatacttggctaaccaagagaaatttcacaaagaagctgac 142
Query: 514 aaaaattactggaaagc 530
||| |||||||||||||
Sbjct: 143 aaacattactggaaagc 159