Miyakogusa Predicted Gene

Lj4g3v0450840.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0450840.2 Non Chatacterized Hit- tr|I1KLI0|I1KLI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42126
PE,86.45,0,seg,NULL; dsrm,Double-stranded RNA-binding; NIF,NLI
interacting factor; DS_RBD,Double-stranded RNA-b,CUFF.47230.2
         (2871 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82668                                                      533   e-150
gnl|LJGI|FS324995                                                     305   8e-82

>gnl|LJGI|TC82668 
          Length = 1020

 Score =  533 bits (269), Expect = e-150
 Identities = 275/277 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2595 tcagaaagatgaagtgcatgcacaggttgaaattgatggtcaggtctttggtaaagggat 2654
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tcagaaagatgaagtgcatgcacaggttgaaattgatggtcaggtctttggtaaagggat 60

                                                                        
Query: 2655 tggattgacatgggatgaggctaaaatgcaggctgccgaaaaggcacttggaagcctaag 2714
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tggattgacatgggatgaggctaaaatgcaggctgccgaaaaggcacttggaagcctaag 120

                                                                        
Query: 2715 aacaatgtatggtcaaagtattcagagacggcagagttctcccaggccacttcagggaat 2774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aacaatgtatggtcaaagtattcagagacggcagagttctcccaggccacttcagggaat 180

                                                                        
Query: 2775 gtcaaataaacgtttgaagcaagaatatccccgaactctgcaacggattccctcttctgc 2834
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 181  gtcaaataaacgtttgaagcaagaatatccccgaactctgcaacggattcccttttttgc 240

                                                 
Query: 2835 gagatatcctaggaatgctccgccaattccatgacaa 2871
            |||||||||||||||||||||||||||||||||||||
Sbjct: 241  gagatatcctaggaatgctccgccaattccatgacaa 277


>gnl|LJGI|FS324995 
          Length = 661

 Score =  305 bits (154), Expect = 8e-82
 Identities = 154/154 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtataaatcggtggtttatcaaggggaggtggtgttgggtgaggttgatatataccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atgtataaatcggtggtttatcaaggggaggtggtgttgggtgaggttgatatataccca 567

                                                                       
Query: 61  gaagtgaccaacaacttcaactacaacaagaaccacctggatgatgatttgatgatgaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaagtgaccaacaacttcaactacaacaagaaccacctggatgatgatttgatgatgaag 627

                                             
Query: 121 gaaatcagaataagcaacttctcccaacccagtg 154
           ||||||||||||||||||||||||||||||||||
Sbjct: 628 gaaatcagaataagcaacttctcccaacccagtg 661