Miyakogusa Predicted Gene
- Lj4g3v0450530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0450530.1 Non Chatacterized Hit- tr|I1LWN6|I1LWN6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.56,0,Short
conserved domain in transcriptional re,Plus-3 domain, subgroup;
PLUS3,Plus-3; Plus-3,Plus-3; c,CUFF.47237.1
(1909 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79973 similar to UniRef100_A7QYP4 Cluster: Chromosome... 2216 0.0
gnl|LJGI|BI420625 weakly similar to UniRef100_Q0IMW0 Cluster: Os... 496 e-139
gnl|LJGI|BP036757 similar to UniRef100_Q8RWR3 Cluster: At1g61040... 260 3e-68
gnl|LJGI|TC79107 similar to UniRef100_A7QYP4 Cluster: Chromosome... 246 4e-64
>gnl|LJGI|TC79973 similar to UniRef100_A7QYP4 Cluster: Chromosome undetermined
scaffold_252, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_252, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(39%)
Length = 1365
Score = 2216 bits (1118), Expect = 0.0
Identities = 1134/1142 (99%)
Strand = Plus / Plus
Query: 768 ggtagatagcgatgatgatagagcattatctgggtctgagggactatcctttcaggatat 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtagatagcgatgatgatagagcattatctgggtctgagggactatcctttcaggatat 60
Query: 828 aaaggaaataactattcgcaggtccaaacttgccaaatggtttatggagcctttctttga 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaggaaataactattcgcaggtccaaacttgccaaatggtttatggagcctttctttga 120
Query: 888 ggagttaatagttggttgcttcgtaagagttggaattggtaggtcaaaatctggacctat 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggagttaatagttggttgcttcgtaagagttggaattggtaggtcaaaatctggacctat 180
Query: 948 ctaccggctctgcatggtgaaaaatgttgatgcctcagatcctgatcggcagtataagtt 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctaccggctctgcatggtgaaaaatgttgatgcctcagatcctgatcggcagtataagtt 240
Query: 1008 agagaataaaattacatacaagtatttgaatgttgtctggggaaatgaaagttctgctgc 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagaataaaattacatacaagtatttgaatgttgtctggggaaatgaaagttctgctgc 300
Query: 1068 taggtggcaaatggctatgattagcgactctgctccacttgaagaggagttcaaacagtg 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taggtggcaaatggctatgattagcgactctgctccacttgaagaggagttcaaacagtg 360
Query: 1128 ggttaaggaagtagagcgaagtggtggccgtatgccaagcaaacaagatgtgttggnnnn 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggttaaggaagtagagcgaagtggtggccgtatgccaagcaaacaagatgtgttggaaaa 420
Query: 1188 nnnncaagcaatacaaaaagccatcacatttgtctactcagcggctactgtgaagcagat 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaacaagcaatacaaaaagccatcacatttgtctactcagcggctactgtgaagcagat 480
Query: 1248 gttacaagagaaaaagtccgcctcgtcacggccattaaatgttgctgctgagaaggatag 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttacaagagaaaaagtccgcctcgtcacggccattaaatgttgctgctgagaaggatag 540
Query: 1308 gctgaggagggaaatggaaatagcaataagtaagaatgatgagtcagaagtggagaggat 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctgaggagggaaatggaaatagcaataagtaagaatgatgagtcagaagtggagaggat 600
Query: 1368 caaagcacgactgatagagttagaggcctccaggcaagaaaaggtgaaggatgctaaggc 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caaagcacgactgatagagttagaggcctccaggcaagaaaaggtgaaggatgctaaggc 660
Query: 1428 tttgaagctggctgagatgaaccgaaagaacaggtttgagaacttcaaaaatgcttctga 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttgaagctggctgagatgaaccgaaagaacaggtttgagaacttcaaaaatgcttctga 720
Query: 1488 aatgaagccagtgaatacaggtttgaaagcaggggaggcaggttatgatcccttctcaag 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatgaagccagtgaatacaggtttgaaagcaggggaggcaggttatgatcccttctcaag 780
Query: 1548 gagatggactagatcaatgaattactatgtttcaaaacctggtgataaggcagcaagtgg 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gagatggactagatcaatgaattactatgtttcaaaacctggtgataaggcagcaagtgg 840
Query: 1608 gaataatagtaccaatggcatagtggctgacgcaggcagcaatggaacaggagtaccggc 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaataatagtaccaatggcatagtggctgacgcaggcagcaatggaacaggagtaccggc 900
Query: 1668 ggaggctggcatggtggctactgttgcagccttggaagccgctgctgatgctggaaagtt 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggaggctggcatggtggctactgttgcagccttggaagccgctgctgatgctggaaagtt 960
Query: 1728 agtggatacaagtgctccagtggaccaagggacagagtcgtattcattgcacaattttga 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agtggatacaagtgctccagtggaccaagggacagagtcgtattcattgcacaattttga 1020
Query: 1788 gctgccgatttccttagcattacttcaaaagttcggcggagcccaaggagctcaggcagg 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gctgccgatttccttagcattacttcaaaagttcggcggagcccaaggagctcaggcagg 1080
Query: 1848 atttatggcaagaaaacaaaaaatagaagcaacagttggatttaaagtcttggagaatga 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 atttatggcaagaaaacaaaaaatagaagcaacagttggatttaaagtcttggagaatga 1140
Query: 1908 tg 1909
||
Sbjct: 1141 tg 1142
>gnl|LJGI|BI420625 weakly similar to UniRef100_Q0IMW0 Cluster: Os12g0535900 protein;
n=2; Oryza sativa Japonica Group|Rep: Os12g0535900
protein - Oryza sativa subsp. japonica (Rice), partial
(6%)
Length = 266
Score = 496 bits (250), Expect = e-139
Identities = 262/266 (98%)
Strand = Plus / Plus
Query: 253 gaagaaggagatgatgatggtcgcagcgatcatgagggtgatagcagtgatgaatcgaat 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagaaggagatgatgatggtcgcagcgatcatgagggtgatagcagtgatgaatcgaat 60
Query: 313 atcggcgatgatctttataaggatgaggatgataggcggaagctttctgagatgtcagaa 372
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 atcggcgatgatctttataaggatgaggatgataggcggaagctttcttttatgtcagaa 120
Query: 373 cttcagagagagatgatcctttcggatagggctgctaaaaaggatgataaaagtttattg 432
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 cttcagagagagatgatcctttcggatagggctgcttaaaaggatgataaaagtttattg 180
Query: 433 gggaagatagcattgaagagggataaaggaaaggcaacagtgcctaggaaacagtctcca 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggaagatagcattgaagagggataaaggaaaggcaacagtgcctaggaaacagtctcca 240
Query: 493 ccactgtcatcatctcggatgcgtgc 518
||||||||||||||||||||||||||
Sbjct: 241 ccactgtcatcatctcggatgcgtgc 266
>gnl|LJGI|BP036757 similar to UniRef100_Q8RWR3 Cluster: At1g61040/T7P1_17; n=1;
Arabidopsis thaliana|Rep: At1g61040/T7P1_17 - Arabidopsis
thaliana (Mouse-ear cress), partial (7%)
Length = 264
Score = 260 bits (131), Expect = 3e-68
Identities = 228/259 (88%), Gaps = 3/259 (1%)
Strand = Plus / Minus
Query: 1059 ttctgctgctaggtggcaaatggctatgattagcgactctgctccacttgaagaggagtt 1118
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttctgctgctaggtggccaatggctatgattagcgactctgctccacttgaagaggagtt 205
Query: 1119 caaacagtgggttaagga-agtagagcgaagtggt-ggccgtatgccaagcaaacaagat 1176
| ||| |||||||||||| ||||||||||| |||| |||| |||||| ||| ||| ||||
Sbjct: 204 ccaaccgtgggttaaggagagtagagcgaaatggtgggccctatgcccagccaaccagat 145
Query: 1177 gtgttggnnnnnnnncaagcaatacaaaaagccatcacatttgtctactcagcggctact 1236
||||||| | ||| |||| |||||| |||| |||| |||||||||||||||
Sbjct: 144 gtgttgggaaaaaaaccagccatacccaaagccctcaccattgtttactcagcggctact 85
Query: 1237 gtgaag-cagatgttacaagagaaaaagtccgcctcgtcacggccattaaatgttgctgc 1295
|||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 84 gtgaagccagatgttaccagagaaaaagtccccctcgtcacggcccataaatgttgctgc 25
Query: 1296 tgagaaggataggctgagg 1314
|||||||||||||||||||
Sbjct: 24 tgagaaggataggctgagg 6
>gnl|LJGI|TC79107 similar to UniRef100_A7QYP4 Cluster: Chromosome undetermined
scaffold_252, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_252, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(23%)
Length = 854
Score = 246 bits (124), Expect = 4e-64
Identities = 301/360 (83%)
Strand = Plus / Plus
Query: 1233 tactgtgaagcagatgttacaagagaaaaagtccgcctcgtcacggccattaaatgttgc 1292
|||||||||||| ||||||||||||||||| || ||||| || | | ||||||||||
Sbjct: 2 tactgtgaagcaaatgttacaagagaaaaaatctgcctcatcgagacggataaatgttgc 61
Query: 1293 tgctgagaaggataggctgaggagggaaatggaaatagcaataagtaagaatgatgagtc 1352
|| ||||||||| || ||||| ||||||||||| ||||| ||||||| ||||||| |
Sbjct: 62 agccgagaaggatcggttgaggtgggaaatggaattagcacaaagtaagcatgatgaagc 121
Query: 1353 agaagtggagaggatcaaagcacgactgatagagttagaggcctccaggcaagaaaaggt 1412
| |||||||||||||| || ||||| ||| || ||||| ||| || ||| |||
Sbjct: 122 tgcggtggagaggatcaagacaagactggaagaattggaggcgtcccggaaagctcagga 181
Query: 1413 gaaggatgctaaggctttgaagctggctgagatgaaccgaaagaacaggtttgagaactt 1472
||||||||| |||||||| | ||| |||| |||||| ||||||||||||||||||||||
Sbjct: 182 gaaggatgccaaggctttaaggctttctgaaatgaacagaaagaacaggtttgagaactt 241
Query: 1473 caaaaatgcttctgaaatgaagccagtgaatacaggtttgaaagcaggggaggcaggtta 1532
||||||||||||| || |||||| || || | | ||||||||||||||||||||||||
Sbjct: 242 caaaaatgcttctcaattgaagcgagcaaacatggatttgaaagcaggggaggcaggtta 301
Query: 1533 tgatcccttctcaaggagatggactagatcaatgaattactatgtttcaaaacctggtga 1592
||| || || |||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 302 tgaccctttttcaaggagatggactagatcaaggaactactatgtttcaaaacctggtga 361
Score = 125 bits (63), Expect = 1e-27
Identities = 174/211 (82%)
Strand = Plus / Plus
Query: 1668 ggaggctggcatggtggctactgttgcagccttggaagccgctgctgatgctggaaagtt 1727
|||| |||||||||||||||||| |||||| |||||||| |||||||||||||| |||||
Sbjct: 446 ggagactggcatggtggctactggtgcagctttggaagctgctgctgatgctgggaagtt 505
Query: 1728 agtggatacaagtgctccagtggaccaagggacagagtcgtattcattgcacaattttga 1787
|| || ||||| | ||| ||||| |||||||||||||| || |||||||||||||
Sbjct: 506 ggtagacacaagcgttccggtggatcaagggacagagtcaaatgagctgcacaattttga 565
Query: 1788 gctgccgatttccttagcattacttcaaaagttcggcggagcccaaggagctcaggcagg 1847
|||||| || || ||| | ||| |||||||| || || ||| |||||| | | ||||
Sbjct: 566 gctgccaatatcattatccgcactccaaaagtttggtggtgccaaaggagtttatgcagc 625
Query: 1848 atttatggcaagaaaacaaaaaatagaagca 1878
||||||||| |||||||||| ||| ||||||
Sbjct: 626 atttatggccagaaaacaaagaattgaagca 656