Miyakogusa Predicted Gene

Lj4g3v0450460.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0450460.1 Non Chatacterized Hit- tr|I3S222|I3S222_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.71,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF1218,Protein of unknown function DUF1218,CUFF.47219.1
         (534 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74413 similar to UniRef100_A7QYP9 Cluster: Chromosome...  1021   0.0  

>gnl|LJGI|TC74413 similar to UniRef100_A7QYP9 Cluster: Chromosome undetermined
           scaffold_252, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_252,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (88%)
          Length = 661

 Score = 1021 bits (515), Expect = 0.0
 Identities = 532/535 (99%), Gaps = 2/535 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcgtctctggtactagcggtggtgtttttgtttgatatcattgcttttgctctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 33  atggcttcgtctctggtactagcggtggtgtttttgtttgatatcattgcttttgttctt 92

                                                                       
Query: 61  gctgttgttgctgaacagaggagaaacactgcctcattactccgaaatgctgaaggtaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  gctgttgttgctgaacagaggagaaacactgcctcattactccgaaatgctgaaggtaga 152

                                                                       
Query: 121 gagtactgtcaatatgattccgacattgcaaccggcctaggtgtggggtccctcttcatt 180
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 153 gagtactgtcaatatgattccgacattgcaaccggcctaggt-tggggtccctcttcatt 211

                                                                       
Query: 181 ctagtttcctgtcaagtgatcatcatggttgttactagatgcctgtgctgtgggaaagct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ctagtttcctgtcaagtgatcatcatggttgttactagatgcctgtgctgtgggaaagct 271

                                                                       
Query: 241 atgagacccagtggatcccgatcatgggcaatttgcttattcatcactacctggttgaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgagacccagtggatcccgatcatgggcaatttgcttattcatcactacctggttgaca 331

                                                                       
Query: 301 ttcattattgctgcttcgtgcctactagccggttctgtgcgtaatgcataccacactaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttcattattgctgcttcgtgcctactagccggttctgtgcgtaatgcataccacactaag 391

                                                                       
Query: 361 tatcgggatctgatgggagataacgcgccttcatgtcaaacgttgaggaagggagtgttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tatcgggatctgatgggagataacgcgccttcatgtcaaacgttgaggaagggagtgttt 451

                                                                       
Query: 421 ggagctggagctgccttcattgttttgacaggcattgcctcggagctttactatgttagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggagctggagctgccttcattgttttgacaggcattgcctcggagctttactatgttagt 511

                                                                  
Query: 481 ttttcaaaag-caataatggcccccctccctatgctagggacactggtgtgagga 534
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttttcaaaagccaataatggcccccctccctatgctagggacactggtgtgagga 566