Miyakogusa Predicted Gene

Lj4g3v0450190.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0450190.1 Non Chatacterized Hit- tr|I3T4M7|I3T4M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,60.71,0,LISH,LisH
dimerisation motif; CTLH,CTLH, C-terminal LisH motif; Lissencephaly
type-1-like homology m,CUFF.47195.1
         (699 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63814 similar to UniRef100_A9TZ15 Cluster: Predicted ...    80   2e-14

>gnl|LJGI|TC63814 similar to UniRef100_A9TZ15 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (96%)
          Length = 1082

 Score = 79.8 bits (40), Expect = 2e-14
 Identities = 166/208 (79%)
 Strand = Plus / Plus

                                                                       
Query: 154 atgaatttcctcgtcgttgagggttatgttgaagttgccgagacattccgacttgccact 213
           ||||||||||| |||  ||||||||||||||||| ||| |||| |||||||   |   ||
Sbjct: 310 atgaatttccttgtcactgagggttatgttgaagctgctgagaaattccgaaaggagtct 369

                                                                       
Query: 214 ggaactaatcctgacatagatattggaagagtcgctgaccgcatggctgttaagactgca 273
           |||||  | || ||||||||| |||  | | || |||| ||||||||||| ||||  |||
Sbjct: 370 ggaaccgaaccagacatagatcttgcgacaatcactgatcgcatggctgtaaagaaggca 429

                                                                       
Query: 274 ttacaaaatggtgatgttcaggctgcaatcgaaaaactcaatgacatggatccagagata 333
            |||||| |||| ||||| ||| ||||||||||||| | |||||| |  |||| ||||||
Sbjct: 430 gtacaaagtggtaatgttgaggatgcaatcgaaaaagtgaatgacttaaatcctgagata 489

                                       
Query: 334 ctgggcacaaatcgccaattatttttcc 361
           ||||  ||||| | |||| |||||||||
Sbjct: 490 ctggatacaaacccccaactatttttcc 517