Miyakogusa Predicted Gene
- Lj4g3v0450050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0450050.1 Non Chatacterized Hit- tr|I3S1K1|I3S1K1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.34,0,N-terminal domain of the delta subunit of the F1F0-ATP
synthase,F1F0 ATP synthase OSCP/delta subunit,CUFF.47323.1
(726 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57854 weakly similar to UniRef100_A7Q2B1 Cluster: Chr... 1439 0.0
gnl|LJGI|TC69746 weakly similar to UniRef100_A7Q2B1 Cluster: Chr... 1035 0.0
gnl|LJGI|AV774795 weakly similar to UniRef100_A1YMZ4 Cluster: Hy... 244 6e-64
gnl|LJGI|AV771726 66 3e-10
>gnl|LJGI|TC57854 weakly similar to UniRef100_A7Q2B1 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (75%)
Length = 1011
Score = 1439 bits (726), Expect = 0.0
Identities = 726/726 (100%)
Strand = Plus / Plus
Query: 1 atggcagcattgtgcaaccgagttagatcggggatcgctctctccaacaaattagggttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atggcagcattgtgcaaccgagttagatcggggatcgctctctccaacaaattagggttc 124
Query: 61 ctcacttcccacagatcctccacccttgttgcccctctggcctccagaaattattccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctcacttcccacagatcctccacccttgttgcccctctggcctccagaaattattccacc 184
Query: 121 catgtgccagggcaaaaggataccaaaattaaggttcctttggcaatgtttggaggttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 catgtgccagggcaaaaggataccaaaattaaggttcctttggcaatgtttggaggttca 244
Query: 181 ggaaactatgcctctgctttgtatattgcagcagtgaaagctaaagcagtggagaaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggaaactatgcctctgctttgtatattgcagcagtgaaagctaaagcagtggagaaggtt 304
Query: 241 gactctgagcttcatcaatttgttgaggcggtaaagaacagttccctagtttcacagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gactctgagcttcatcaatttgttgaggcggtaaagaacagttccctagtttcacagttt 364
Query: 301 gtaaaggacatatctgtggctaaggatgttagagtcaaggccatcgaggagatttctcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtaaaggacatatctgtggctaaggatgttagagtcaaggccatcgaggagatttctcgt 424
Query: 361 gaagctaagtttgcagaggttacaaagaatttccttgttgttgtcgctgagaatgggagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaagctaagtttgcagaggttacaaagaatttccttgttgttgtcgctgagaatgggagg 484
Query: 421 cttaaaaacatagacaccattgcaaagaggtttggtgagttggcaatggcatataaggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cttaaaaacatagacaccattgcaaagaggtttggtgagttggcaatggcatataaggga 544
Query: 481 gaagtgaaagcgactgtgaccactgtctttcctctcccccctgaagaggagaaggcactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaagtgaaagcgactgtgaccactgtctttcctctcccccctgaagaggagaaggcactg 604
Query: 541 aaggagactgttcaggaaatcataggttctggggctaaggtttcacttgaacagaagatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaggagactgttcaggaaatcataggttctggggctaaggtttcacttgaacagaagatt 664
Query: 601 gatccaagcatccttggtggcctggtgctggaatttagccaaaaggtctttgacatgtca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gatccaagcatccttggtggcctggtgctggaatttagccaaaaggtctttgacatgtca 724
Query: 661 attaggaccagggcacaacagatggagaggatcctccgagagcccataaatatttccaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 attaggaccagggcacaacagatggagaggatcctccgagagcccataaatatttccaac 784
Query: 721 atctag 726
||||||
Sbjct: 785 atctag 790
>gnl|LJGI|TC69746 weakly similar to UniRef100_A7Q2B1 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (51%)
Length = 644
Score = 1035 bits (522), Expect = 0.0
Identities = 528/530 (99%)
Strand = Plus / Plus
Query: 1 atggcagcattgtgcaaccgagttagatcggggatcgctctctccaacaaattagggttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atggcagcattgtgcaaccgagttagatcggggatcgctctctccaacaaattagggttc 174
Query: 61 ctcacttcccacagatcctccacccttgttgcccctctggcctccagaaattattccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ctcacttcccacagatcctccacccttgttgcccctctggcctccagaaattattccacc 234
Query: 121 catgtgccagggcaaaaggataccaaaattaaggttcctttggcaatgtttggaggttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 catgtgccagggcaaaaggataccaaaattaaggttcctttggcaatgtttggaggttca 294
Query: 181 ggaaactatgcctctgctttgtatattgcagcagtgaaagctaaagcagtggagaaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ggaaactatgcctctgctttgtatattgcagcagtgaaagctaaagcagtggagaaggtt 354
Query: 241 gactctgagcttcatcaatttgttgaggcggtaaagaacagttccctagtttcacagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gactctgagcttcatcaatttgttgaggcggtaaagaacagttccctagtttcacagttt 414
Query: 301 gtaaaggacatatctgtggctaaggatgttagagtcaaggccatcgaggagatttctcgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gtaaaggacatatctgtggctaaggatgttagagtcaaggccatcgaggagatttctcgt 474
Query: 361 gaagctaagtttgcagaggttacaaagaatttccttgttgttgtcgctgagaatgggagg 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 475 gaagctaagtttgcagaggttacaaagaatttccttgttgttgtcactgagaatgggagg 534
Query: 421 cttaaaaacatagacaccattgcaaagaggtttggtgagttggcaatggcatataaggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cttaaaaacatagacaccattgcaaagaggtttggtgagttggcaatggcatataaggga 594
Query: 481 gaagtgaaagcgactgtgaccactgtctttcctctcccccctgaagagga 530
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 595 gaagtgaaagcgactgtgaccactgcctttcctctcccccctgaagagga 644
>gnl|LJGI|AV774795 weakly similar to UniRef100_A1YMZ4 Cluster: Hydrogen-transporting
ATP synthase; n=1; Brassica rapa|Rep:
Hydrogen-transporting ATP synthase - Brassica campestris
(Field mustard), partial (21%)
Length = 417
Score = 244 bits (123), Expect = 6e-64
Identities = 157/167 (94%), Gaps = 1/167 (0%)
Strand = Plus / Minus
Query: 561 cataggttctggggctaaggtttcacttgaacagaagattgatccaagcatcc-ttggtg 619
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 417 cataggttctgggtctaaggtttcacttgaacagaagattgatccaagcatcccttggtg 358
Query: 620 gcctggtgctggaatttagccaaaaggtctttgacatgtcaattaggaccagggcacaac 679
|||||||||||||||||||||||| | ||||||||||||| ||||||| |||||||||
Sbjct: 357 gcctggtgctggaatttagccaaacgctctttgacatgtccattaggaacagggcacaca 298
Query: 680 agatggagaggatcctccgagagcccataaatatttccaacatctag 726
|||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 297 cgatggagaggatcctccgagagcccatacatatttccaacatctag 251
>gnl|LJGI|AV771726
Length = 514
Score = 65.9 bits (33), Expect = 3e-10
Identities = 83/93 (89%), Gaps = 5/93 (5%)
Strand = Plus / Minus
Query: 639 ccaaaagg-tctttgacatgtcaa-ttaggaccagggcacaaca-gatggagaggatcct 695
|||||||| ||||||||||||| | |||||| | |||||| ||| |||||||||||||||
Sbjct: 241 ccaaaaggctctttgacatgtccacttaggaaccgggcaccacacgatggagaggatcct 182
Query: 696 ccgaga-gcccata-aatatttccaacatctag 726
|||||| ||||||| | ||||||||||||||||
Sbjct: 181 ccgagacgcccatacactatttccaacatctag 149