Miyakogusa Predicted Gene
- Lj4g3v0445700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0445700.1 Non Chatacterized Hit- tr|F2UCU9|F2UCU9_SALS5
Putative uncharacterized protein OS=Salpingoeca sp.
(s,33.54,0.000000000000003,WD40,WD40 repeat; no description,WD40/YVTN
repeat-like-containing domain; WD_REPEATS_2,WD40 repeat; ,CUFF.47168.1
(1242 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66159 similar to UniRef100_Q0DNR7 Cluster: Os03g07380... 1459 0.0
gnl|LJGI|GO013126 similar to UniRef100_Q2HTZ8 Cluster: Cytochrom... 745 0.0
gnl|LJGI|TC75490 similar to UniRef100_Q2HTZ7 Cluster: WD40-like;... 737 0.0
gnl|LJGI|BW599291 similar to UniRef100_Q2HTZ7 Cluster: WD40-like... 165 8e-40
>gnl|LJGI|TC66159 similar to UniRef100_Q0DNR7 Cluster: Os03g0738000 protein; n=1;
Oryza sativa Japonica Group|Rep: Os03g0738000 protein -
Oryza sativa subsp. japonica (Rice), partial (31%)
Length = 761
Score = 1459 bits (736), Expect = 0.0
Identities = 739/740 (99%)
Strand = Plus / Plus
Query: 1 atgggagaagaagaagaggcagttgaatccatcgcagccaccaaccccaacgaagagtac 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggtagaagaagaagaggcagttgaatccatcgcagccaccaaccccaacgaagagtac 81
Query: 61 tccctccccgtgctccggttcgatgttcctcctcatcgaacctaccacttccaccgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tccctccccgtgctccggttcgatgttcctcctcatcgaacctaccacttccaccgccag 141
Query: 121 ttcaccactccgacgaaccctaacaatttcctcaaagccgttaaatggtcccccgatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ttcaccactccgacgaaccctaacaatttcctcaaagccgttaaatggtcccccgatggc 201
Query: 181 tccggtttcctctcctcttccgatgacaacactctccgcctcttcactctaccgtgtagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tccggtttcctctcctcttccgatgacaacactctccgcctcttcactctaccgtgtagc 261
Query: 241 gaaagtgacactcctattgcttcttccggcgacgacgattcctttgatgtgagtcttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaaagtgacactcctattgcttcttccggcgacgacgattcctttgatgtgagtcttgta 321
Query: 301 atgagagaaggagaggctatacatgacttctgctggtatccttacatgtccgccgcagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgagagaaggagaggctatacatgacttctgctggtatccttacatgtccgccgcagat 381
Query: 361 ccggtgaccaatgttttcgcgacgactactcgcgaccatccgatacatttatgggatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccggtgaccaatgttttcgcgacgactactcgcgaccatccgatacatttatgggatgca 441
Query: 421 acgtcaggccagttacgttgcacttatcgggcatatgatgctatggatgaaattactact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acgtcaggccagttacgttgcacttatcgggcatatgatgctatggatgaaattactact 501
Query: 481 gctttttcaattgcttttaatcctgcggggagtaggatatttgctggatacaacaaatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gctttttcaattgcttttaatcctgcggggagtaggatatttgctggatacaacaaatgt 561
Query: 541 attaggatttttgatttacatcgccctggtagagactttgaattgcattctacagtaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 attaggatttttgatttacatcgccctggtagagactttgaattgcattctacagtaaaa 621
Query: 601 gataaaaaagaaggccaaacaggtgttatatcggcactggctttttctccttctcatact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gataaaaaagaaggccaaacaggtgttatatcggcactggctttttctccttctcatact 681
Query: 661 gggatgctagctctgggatcttacagtcaaactgctgctatttatagggaagataacatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gggatgctagctctgggatcttacagtcaaactgctgctatttatagggaagataacatg 741
Query: 721 gagctcttgtaccttttgca 740
||||||||||||||||||||
Sbjct: 742 gagctcttgtaccttttgca 761
>gnl|LJGI|GO013126 similar to UniRef100_Q2HTZ8 Cluster: Cytochrome cd1-nitrite
reductase-like, C-terminal haem d1; n=1; Medicago
truncatula|Rep: Cytochrome cd1-nitrite reductase-like,
C-terminal haem d1 - Medicago truncatula (Barrel medic),
partial (7%)
Length = 635
Score = 745 bits (376), Expect = 0.0
Identities = 376/376 (100%)
Strand = Plus / Plus
Query: 167 ggtcccccgatggctccggtttcctctcctcttccgatgacaacactctccgcctcttca 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggtcccccgatggctccggtttcctctcctcttccgatgacaacactctccgcctcttca 319
Query: 227 ctctaccgtgtagcgaaagtgacactcctattgcttcttccggcgacgacgattcctttg 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctctaccgtgtagcgaaagtgacactcctattgcttcttccggcgacgacgattcctttg 379
Query: 287 atgtgagtcttgtaatgagagaaggagaggctatacatgacttctgctggtatccttaca 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgtgagtcttgtaatgagagaaggagaggctatacatgacttctgctggtatccttaca 439
Query: 347 tgtccgccgcagatccggtgaccaatgttttcgcgacgactactcgcgaccatccgatac 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtccgccgcagatccggtgaccaatgttttcgcgacgactactcgcgaccatccgatac 499
Query: 407 atttatgggatgcaacgtcaggccagttacgttgcacttatcgggcatatgatgctatgg 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atttatgggatgcaacgtcaggccagttacgttgcacttatcgggcatatgatgctatgg 559
Query: 467 atgaaattactactgctttttcaattgcttttaatcctgcggggagtaggatatttgctg 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgaaattactactgctttttcaattgcttttaatcctgcggggagtaggatatttgctg 619
Query: 527 gatacaacaaatgtat 542
||||||||||||||||
Sbjct: 620 gatacaacaaatgtat 635
Score = 335 bits (169), Expect = 4e-91
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1 atgggagaagaagaagaggcagttgaatccatcgcagccaccaaccccaacgaagagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 atgggagaagaagaagaggcagttgaatccatcgcagccaccaaccccaacgaagagtac 82
Query: 61 tccctccccgtgctccggttcgatgttcctcctcatcgaacctaccacttccaccgccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tccctccccgtgctccggttcgatgttcctcctcatcgaacctaccacttccaccgccag 142
Query: 121 ttcaccactccgacgaaccctaacaatttcctcaaagccgttaaatggt 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ttcaccactccgacgaaccctaacaatttcctcaaagccgttaaatggt 191
>gnl|LJGI|TC75490 similar to UniRef100_Q2HTZ7 Cluster: WD40-like; n=1; Medicago
truncatula|Rep: WD40-like - Medicago truncatula (Barrel
medic), partial (43%)
Length = 806
Score = 737 bits (372), Expect = 0.0
Identities = 378/380 (99%)
Strand = Plus / Plus
Query: 863 acaagttataccgatcagcagaaaacaccaaccagcggattctgtttgatattgaccctt 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaagttataccgatcagcagaaaacaccaaccagcggattctgtttgatattgaccctt 60
Query: 923 ctggacaacatcttgctacaggtggccaggatggtttagtacatatatatgatcttcaaa 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctggacaacatcttgctacaggtggccaggatggtttagtacatatatatgatcttcaaa 120
Query: 983 cagggcagtgggtgtcaagttttgaggctgctttagacacagttaactgcttctctttcc 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagggcagtgggtgtcaagttttgaggctgctttagacacagttaactgcttctctttcc 180
Query: 1043 atccatttctttcctatggggtctcatcgtcaggacaccgaagatttgtagttccagatg 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atccatttctttcctatggggtctcatcgtcaggacaccgaagatttgtagttccagatg 240
Query: 1103 atagcaatgaagaattgtgtttaagtggtcgtgaaaactgcatctcagtatggagtttct 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagcaatgaagaattgtgtttaagtggtcgtgaaaactgcatctcagtatggagtttct 300
Query: 1163 attacgattcaatgattgagaaggacttcaaggacaatggcagttgcaataatcagtctg 1222
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 301 attacgattcaatgattgagaaggacttcaaggaccatggcagttgccataatcagtctg 360
Query: 1223 gaaatgaatacatggattaa 1242
||||||||||||||||||||
Sbjct: 361 gaaatgaatacatggattaa 380
>gnl|LJGI|BW599291 similar to UniRef100_Q2HTZ7 Cluster: WD40-like; n=1; Medicago
truncatula|Rep: WD40-like - Medicago truncatula (Barrel
medic), partial (24%)
Length = 454
Score = 165 bits (83), Expect = 8e-40
Identities = 128/139 (92%), Gaps = 3/139 (2%)
Strand = Plus / Plus
Query: 901 attctgtttgatattgacccttctggacaacatcttgctacaggtggccaggatggttta 960
|||||| | |||||||||||||| ||||| | || |||| ||| ||||||| |||||||
Sbjct: 319 attctgatcgatattgacccttccggaca-cttcctgcttcag-tggccagc-tggttta 375
Query: 961 gtacatatatatgatcttcaaacagggcagtgggtgtcaagttttgaggctgctttagac 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 376 gtacatatatatgatcttcaaacagggcagtgggtgtcaagttttgaggctgctttggac 435
Query: 1021 acagttaactgcttctctt 1039
|||||||||||||||||||
Sbjct: 436 acagttaactgcttctctt 454