Miyakogusa Predicted Gene

Lj4g3v0445610.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0445610.1 tr|E3SER8|E3SER8_ELAGV F-box protein OS=Elaeis
guineensis var. tenera GN=FB1 PE=2 SV=1,43.06,5e-18,FBOX,F-box domain,
cyclin-like,CUFF.47162.1
         (465 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71517 similar to UniRef100_Q2HTZ5 Cluster: At1g61340;...   914   0.0  
gnl|LJGI|BW597555 similar to UniRef100_Q2HTZ5 Cluster: At1g61340...   363   e-100

>gnl|LJGI|TC71517 similar to UniRef100_Q2HTZ5 Cluster: At1g61340; n=1; Medicago
           truncatula|Rep: At1g61340 - Medicago truncatula (Barrel
           medic), partial (55%)
          Length = 763

 Score =  914 bits (461), Expect = 0.0
 Identities = 464/465 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgttagggtttgagggttatagttttgcgagaacactatcaatggggaggaagagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atggcgttagggtttgagggttatagttttgcgagaacactatcaatggggaggaagagg 225

                                                                       
Query: 61  gttgtggttaccaataatgtggaaaatgattcagtgatgactccgttgaagcgagtttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gttgtggttaccaataatgtggaaaatgattcagtgatgactccgttgaagcgagtttgc 285

                                                                       
Query: 121 agtgggagaatcaatttcaactcggaaaggtctcgccttgaagctcttcctcttgatgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agtgggagaatcaatttcaactcggaaaggtctcgccttgaagctcttcctcttgatgtt 345

                                                                       
Query: 181 ctgattagggtgttgtgtggtgtggaccatgaagatctggagcagcttttacatgtttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctgattagggtgttgtgtggtgtggaccatgaagatctggagcagcttttacatgtttca 405

                                                                       
Query: 241 aaaacaattagagaagcgactgagattgcaagggatttccattttgagtatagcacacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaaacaattagagaagcgactgagattgcaagggatttccattttgagtatagcacacca 465

                                                                       
Query: 301 aagaagaaaacttttggttttcgttcaccatttgacattgaggatgctaatgagtttgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aagaagaaaacttttggttttcgttcaccatttgacattgaggatgctaatgagtttgag 525

                                                                       
Query: 361 gaaattgaagctccaaaagcacctttgaggaaatcagtaaaatcaaggctgagtggtaag 420
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 526 gaaattgaagctccaaaagcacctttgaggaaatcagtaaaatcaaagctgagtggtaag 585

                                                        
Query: 421 aatctgggtggaatctcagttgccttgtttggttccactgagtaa 465
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aatctgggtggaatctcagttgccttgtttggttccactgagtaa 630


>gnl|LJGI|BW597555 similar to UniRef100_Q2HTZ5 Cluster: At1g61340; n=1; Medicago
           truncatula|Rep: At1g61340 - Medicago truncatula (Barrel
           medic), partial (25%)
          Length = 476

 Score =  363 bits (183), Expect = e-100
 Identities = 183/183 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgttagggtttgagggttatagttttgcgagaacactatcaatggggaggaagagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atggcgttagggtttgagggttatagttttgcgagaacactatcaatggggaggaagagg 181

                                                                       
Query: 61  gttgtggttaccaataatgtggaaaatgattcagtgatgactccgttgaagcgagtttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gttgtggttaccaataatgtggaaaatgattcagtgatgactccgttgaagcgagtttgc 241

                                                                       
Query: 121 agtgggagaatcaatttcaactcggaaaggtctcgccttgaagctcttcctcttgatgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agtgggagaatcaatttcaactcggaaaggtctcgccttgaagctcttcctcttgatgtt 301

              
Query: 181 ctg 183
           |||
Sbjct: 302 ctg 304



 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                      
Query: 183 gattagggtgttgtgtggtgtggaccatgaagatctggagcag 225
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gattagggtgttgtgtggtgtggaccatgaagatctggagcag 476