Miyakogusa Predicted Gene

Lj4g3v0423110.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0423110.1 tr|A9T954|A9T954_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_168735,53.21,2e-17,seg,NULL,CUFF.47119.1
         (1905 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81401 similar to UniRef100_A7R637 Cluster: Chromosome...   955   0.0  

>gnl|LJGI|TC81401 similar to UniRef100_A7R637 Cluster: Chromosome undetermined
            scaffold_1147, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_1147,
            whole genome shotgun sequence - Vitis vinifera (Grape),
            partial (36%)
          Length = 812

 Score =  955 bits (482), Expect = 0.0
 Identities = 498/501 (99%), Gaps = 3/501 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1405 gttgagaattcaaatagggttgagcctaacattttgaaggctgagaaacttcctgatcct 1464
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5    gttgagaattcaa-tagggttgagcctaacattttgaaggctgagaaacttcctgatcct 63

                                                                        
Query: 1465 tcaatccaatctcgacacggtgaaaaggctaatgatgctcctcttgatcaaagaacaggc 1524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64   tcaatccaatctcgacacggtgaaaaggctaatgatgctcctcttgatcaaagaacaggc 123

                                                                        
Query: 1525 agaaaacccgaaaggaaagagcaaagggtagatggtgagagaggtcattcacagaagagg 1584
            |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 124  agaaaacccgaaaggaaagagcaaagggtagatggtgagagaggtcattca--gaagagg 181

                                                                        
Query: 1585 aattggcgtggtggtgataatcggagaaacgcaagggagactgagaggcagcagccggcc 1644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  aattggcgtggtggtgataatcggagaaacgcaagggagactgagaggcagcagccggcc 241

                                                                        
Query: 1645 cctgagaggccagcttcacccgagacatggcgtaagcctgtggagcagccaaagccatct 1704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  cctgagaggccagcttcacccgagacatggcgtaagcctgtggagcagccaaagccatct 301

                                                                        
Query: 1705 cagggtgttggcggcccgcgcaacggtagagcggcttcagcagttgaacttgcccaagca 1764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  cagggtgttggcggcccgcgcaacggtagagcggcttcagcagttgaacttgcccaagca 361

                                                                        
Query: 1765 ttctccagatctgtatctgatccgaaagtaaatgacaggttttcaggtcaaaatggtctg 1824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362  ttctccagatctgtatctgatccgaaagtaaatgacaggttttcaggtcaaaatggtctg 421

                                                                        
Query: 1825 aacactggccgtacacaacaaatgcctttttcgcggcttgttggtccaacacctaggcct 1884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422  aacactggccgtacacaacaaatgcctttttcgcggcttgttggtccaacacctaggcct 481

                                 
Query: 1885 cagatcaatggttattaggtc 1905
            |||||||||||||||||||||
Sbjct: 482  cagatcaatggttattaggtc 502