Miyakogusa Predicted Gene
- Lj4g3v0412640.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0412640.2 Non Chatacterized Hit- tr|I1KQU4|I1KQU4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3186
PE=,85.59,0,FAD/NAD(P)-binding domain,NULL; SE,Squalene epoxidase;
SQUALENE MONOOXYGENASE,NULL; no description,N,CUFF.48671.2
(606 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67852 similar to UniRef100_A7QGY6 Cluster: Chromosome... 325 2e-88
gnl|LJGI|TC81169 similar to UniRef100_Q506K3 Cluster: Squalene m... 238 3e-62
gnl|LJGI|DC596850 similar to UniRef100_Q75W20 Cluster: Squalene ... 117 8e-26
gnl|LJGI|TC68328 homologue to UniRef100_A7QGY6 Cluster: Chromoso... 96 3e-19
gnl|LJGI|AV422100 similar to UniRef100_A7VJN1 Cluster: Squalene ... 88 7e-17
gnl|LJGI|TC63410 homologue to UniRef100_Q8GSM8 Cluster: Squalene... 70 2e-11
>gnl|LJGI|TC67852 similar to UniRef100_A7QGY6 Cluster: Chromosome chr3 scaffold_95,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_95, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 616
Score = 325 bits (164), Expect = 2e-88
Identities = 260/292 (89%)
Strand = Plus / Plus
Query: 308 gcaagcctatggcatctacgataaacacattagctacagcattgcccaaggtgtttcgtg 367
||||||| |||||||||| ||||||||||||||| |||||| |||||||||| |||
Sbjct: 1 gcaagccagtggcatctacaataaacacattagctggggcattgtacaaggtgttttgtg 60
Query: 368 tatctcctgaccctgctatgaaggaattgcaacaggcattccttgattatttgagccttg 427
||||||||| ||||||||||||||| || ||| |||| ||||||||||||||||||
Sbjct: 61 catctcctgatcctgctatgaaggaaatgagacaagcatgttttgattatttgagccttg 120
Query: 428 gaagagttttctcagagggactagcatctctcctctctggactaaatcctcgtccattga 487
|||| |||||||||||||||| | || |||| |||||||| ||||||||||||||| |||
Sbjct: 121 gaagtgttttctcagagggaccaacagctctgctctctggtctaaatcctcgtccactga 180
Query: 488 gcgtggttctccatttcttcgcggtggctatatatggcgttggccgacttctgaaaccat 547
|| | ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 181 gcttagttctccatttcttcgcggtggctatatatggcgttggccgacttatgataccat 240
Query: 548 ttccttctccgaaacgaatatggattggagctaggttgatttcaggtgcagc 599
|||||||||| ||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 241 ttccttctccaaaacggatatggattggagctagattgatttcaggtgcagc 292
>gnl|LJGI|TC81169 similar to UniRef100_Q506K3 Cluster: Squalene monooxygenase; n=1;
Datura inoxia|Rep: Squalene monooxygenase - Datura
innoxia (Downy thornapple) (Datura meteloides), partial
(13%)
Length = 378
Score = 238 bits (120), Expect = 3e-62
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 487 agcgtggttctccatttcttcgcggtggctatatatggcgttggccgacttctgaaacca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcgtggttctccatttcttcgcggtggctatatatggcgttggccgacttctgaaacca 60
Query: 547 tttccttctccgaaacgaatatggattggagctaggttgatttcaggtgcagcttgtatc 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttccttctccgaaacgaatatggattggagctaggttgatttcaggtgcagcttgtatc 120
>gnl|LJGI|DC596850 similar to UniRef100_Q75W20 Cluster: Squalene epoxidase; n=1; Panax
ginseng|Rep: Squalene epoxidase - Panax ginseng (Korean
ginseng), partial (35%)
Length = 566
Score = 117 bits (59), Expect = 8e-26
Identities = 155/187 (82%)
Strand = Plus / Plus
Query: 74 ttgataaaggaaatatgagaaccatgcccagtagattcatgcctgcctcacctcatccca 133
|||||||||||| || |||| |||||| | ||| ||||||||| || ||||| ||||
Sbjct: 362 ttgataaaggaagcataagaagcatgccaaacagaagcatgcctgcatctcctcagccca 421
Query: 134 cacctggtgcccttttgatcggagacgcgttcaatatgcgtcaccctttaaccggaggag 193
|||| ||||||||| |||| |||||||| ||||| ||||| ||||| ||||| |||||||
Sbjct: 422 cacccggtgcccttctgatgggagacgccttcaacatgcgccacccgttaactggaggag 481
Query: 194 gaatgaccgtggctttggctgatattgttgtgttgaggaatctacttagacctctgcatg 253
||||||| || |||||| |||| |||||| |||| ||| |||| ||||| ||| |||| |
Sbjct: 482 gaatgactgttgctttgtctgacattgttttgttaagggatcttcttaggcctttgcagg 541
Query: 254 atttgca 260
|| ||||
Sbjct: 542 atctgca 548
>gnl|LJGI|TC68328 homologue to UniRef100_A7QGY6 Cluster: Chromosome chr3 scaffold_95,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_95, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 616
Score = 95.6 bits (48), Expect = 3e-19
Identities = 153/188 (81%)
Strand = Plus / Plus
Query: 410 ttgattatttgagccttggaagagttttctcagagggactagcatctctcctctctggac 469
|||||||||||| |||||| | ||||||||||| |||| | | |||| |||||||| |
Sbjct: 14 ttgattatttgacacttggaggtgttttctcagatggaccaatagctcttctctctggtc 73
Query: 470 taaatcctcgtccattgagcgtggttctccatttcttcgcggtggctatatatggcgttg 529
||||||| ||||| ||| | |||||||| ||||| || |||||||| ||||| ||||
Sbjct: 74 taaatccaaagccattaagcttagttctccacttctttgccgtggctatttatggtgttg 133
Query: 530 gccgacttctgaaaccatttccttctccgaaacgaatatggattggagctaggttgattt 589
| || | || ||||||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 134 gtcgtttattggtaccatttccttctccaaaacgcatgtggattggagctagattgattt 193
Query: 590 caggtgca 597
| ||||||
Sbjct: 194 cgggtgca 201
>gnl|LJGI|AV422100 similar to UniRef100_A7VJN1 Cluster: Squalene epoxidase; n=1;
Euphorbia tirucalli|Rep: Squalene epoxidase - Euphorbia
tirucalli (Pencil tree), partial (14%)
Length = 472
Score = 87.7 bits (44), Expect = 7e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 1 atggccctttatttgaaaactgtggtagcttcccaggttcctcctgag 48
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 425 atggccctttatatgaaaactgtggtagcttcccaggttcctcctgag 472
>gnl|LJGI|TC63410 homologue to UniRef100_Q8GSM8 Cluster: Squalene monooxygenase 1;
n=1; Medicago truncatula|Rep: Squalene monooxygenase 1 -
Medicago truncatula (Barrel medic), partial (33%)
Length = 666
Score = 69.9 bits (35), Expect = 2e-11
Identities = 89/107 (83%)
Strand = Plus / Plus
Query: 470 taaatcctcgtccattgagcgtggttctccatttcttcgcggtggctatatatggcgttg 529
|||| ||||| || |||||| |||||||||||||||| || || || |||||||| ||||
Sbjct: 288 taaaccctcggcccttgagcttggttctccatttctttgccgttgcaatatatggggttg 347
Query: 530 gccgacttctgaaaccatttccttctccgaaacgaatatggattgga 576
|||| | || |||||||||||| || ||||| ||||||||||||
Sbjct: 348 gccgtttactcctaccatttccttcccctaaacgcatatggattgga 394