Miyakogusa Predicted Gene
- Lj4g3v0412640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0412640.1 Non Chatacterized Hit- tr|I1KL88|I1KL88_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56390
PE,74.19,0,seg,NULL; DAO,FAD dependent oxidoreductase; no
description,NULL; SQUALENE MONOOXYGENASE,NULL; FAD/NA,CUFF.48671.1
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036224 homologue to UniRef100_Q2HY08 Cluster: Squalen... 434 e-121
gnl|LJGI|AV422100 similar to UniRef100_A7VJN1 Cluster: Squalene ... 412 e-114
gnl|LJGI|DC596850 similar to UniRef100_Q75W20 Cluster: Squalene ... 228 5e-59
gnl|LJGI|DC595779 similar to UniRef100_A7VJN1 Cluster: Squalene ... 188 4e-47
gnl|LJGI|TC63518 similar to UniRef100_Q8GSM9 Cluster: Squalene m... 105 5e-22
gnl|LJGI|TC58216 similar to UniRef100_Q8GSM8 Cluster: Squalene m... 86 5e-16
>gnl|LJGI|GO036224 homologue to UniRef100_Q2HY08 Cluster: Squalene epoxidase; n=1;
Medicago sativa|Rep: Squalene epoxidase - Medicago
sativa (Alfalfa), partial (20%)
Length = 647
Score = 434 bits (219), Expect = e-121
Identities = 410/471 (87%), Gaps = 7/471 (1%)
Strand = Plus / Plus
Query: 34 gcttgtagtttggccttagtgtttggtctgtaccaatttgcagagaagaggaaggccaca 93
||||||||||||||||| |||||| ||||||| ||||||| |||||||| ||||||
Sbjct: 177 gcttgtagtttggcctttttgtttgttctgtacagttttgcagcaaagaggaatgccaca 236
Query: 94 aatccaagttcaatgcatgtaaagagtagtaatgggtgtgcaaagacaacatcagaaaat 153
| | |||||| | | ||| ||||||||| ||||| ||||||||||| |||||||||
Sbjct: 237 agttcaagtttattacatttaaagagta---atgggagtgcaaagaca---tcagaaaat 290
Query: 154 ggaatatgcccacaaaatggtgaaggaagtactgacatcatcattgttggtgctggagtt 213
|||||||||| |||||| ||||||||||||| || ||||||||||||||||||| |||
Sbjct: 291 ggaatatgccaacaaaagggtgaaggaagtatagatgtcatcattgttggtgctggggtt 350
Query: 214 gctggcgcagcccttgcttacacacttggagaggatggacggcgagtgcatgtgattgaa 273
||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 351 gctggtgcagctcttgcttacacacttggaaaggatggaaggcgagtgcatgtgattgaa 410
Query: 274 agggacttgaatgaacctgacaggattgttggtgaagtactaatacctgggggctatctc 333
|||||||||| ||||||||| |||||||| |||||| | || |||||| |||||||||
Sbjct: 411 agggacttgagtgaacctgataggattgtgggtgaattgttacaacctggtggctatctc 470
Query: 334 aagttaattgagttgggtctggaggattgtttggatgaaattgatgctcagcaaatcttt 393
|||||||||||||||||||| ||||||||| ||||||||||||||||||| || |||||
Sbjct: 471 aagttaattgagttgggtcttgaggattgtgtggatgaaattgatgctcaaaaagtcttt 530
Query: 394 ggatatgccttttataaggatgggaaagttgccaagttatcttatcctttggaaaaattt 453
|| ||||| ||||||||||||| |||| | ||||||| ||||| || |||| |||||||
Sbjct: 531 ggctatgctctttataaggatggtaaagataccaagttgtcttaccccttgg-aaaattt 589
Query: 454 gattctcatgtttctgggaaaagctttcacaatggtcgtttcatacagaga 504
||||| |||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 590 cattctgatgtttctgggagaagctttcacaatggccgtttcatacagaga 640
>gnl|LJGI|AV422100 similar to UniRef100_A7VJN1 Cluster: Squalene epoxidase; n=1;
Euphorbia tirucalli|Rep: Squalene epoxidase - Euphorbia
tirucalli (Pencil tree), partial (14%)
Length = 472
Score = 412 bits (208), Expect = e-114
Identities = 226/232 (97%)
Strand = Plus / Plus
Query: 702 ggttgaagtgccctctcattttgttgcactagtcttggagaactgtaatcttccatatgc 761
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggttgaagtgtcctctcattttgttgcactagtcttggagaactgtaatcttccatatgc 300
Query: 762 aaatcatggacacattatctttggtgatccttcaacaattttaagttatcccattagtag 821
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 aaatcatggacacgttatctttggtgatccttcaacaattttaatttatcccattagtag 360
Query: 822 cactgaggttcgctgttttgttgaattgcatggccaaaagttaccttccattggtaatgg 881
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361 cactgaggttcgctgttttgttgaatttcatggccaaaagttaccttccattggtaatgg 420
Query: 882 tgaaatggccctttatttgaaaactgtggtagcttcccaggttcctcctgag 933
| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 taaaatggccctttatatgaaaactgtggtagcttcccaggttcctcctgag 472
>gnl|LJGI|DC596850 similar to UniRef100_Q75W20 Cluster: Squalene epoxidase; n=1; Panax
ginseng|Rep: Squalene epoxidase - Panax ginseng (Korean
ginseng), partial (35%)
Length = 566
Score = 228 bits (115), Expect = 5e-59
Identities = 274/327 (83%)
Strand = Plus / Plus
Query: 600 ctacaaaaccaagagtggacaagaactcatagcaaaggctcccctcaccatagtgtgtga 659
|||||||||||||||||||||||| |||| ||||| |||||| ||||||||||| |||||
Sbjct: 3 ctacaaaaccaagagtggacaagagctcacagcaatggctcctctcaccatagtatgtga 62
Query: 660 tggttgtttttccaacttgaggcgctctctttgcacccctaaggttgaagtgccctctca 719
||||||||| ||||||||||| || |||||||||| ||| |||||||| || || |||||
Sbjct: 63 tggttgtttctccaacttgagacgttctctttgcaacccaaaggttgatgtaccatctca 122
Query: 720 ttttgttgcactagtcttggagaactgtaatcttccatatgcaaatcatggacacattat 779
|||||||| ||||| |||| ||||| || |||||| ||||||| ||||| || || |
Sbjct: 123 ttttgttggtctagttctggaaaactgcaaccttccacatgcaaaccatggccatgttgt 182
Query: 780 ctttggtgatccttcaacaattttaagttatcccattagtagcactgaggttcgctgttt 839
||| | ||||||||| | || || ||| |||||||| ||||||||| |||| |||||
Sbjct: 183 cttggctgatccttctcccatcttgttttaccccattagcagcactgagattcggtgttt 242
Query: 840 tgttgaattgcatggccaaaagttaccttccattggtaatggtgaaatggccctttattt 899
||||| ||| ||||||||| ||||| ||||||||||||||||| ||||| | ||||||
Sbjct: 243 ggttgatgtgcctggccaaaaattaccatccattggtaatggtgacatggctcattattt 302
Query: 900 gaaaactgtggtagcttcccaggttcc 926
|||||| | |||||| | ||||||||
Sbjct: 303 gaaaacaatagtagctcctcaggttcc 329
>gnl|LJGI|DC595779 similar to UniRef100_A7VJN1 Cluster: Squalene epoxidase; n=1;
Euphorbia tirucalli|Rep: Squalene epoxidase - Euphorbia
tirucalli (Pencil tree), partial (9%)
Length = 147
Score = 188 bits (95), Expect = 4e-47
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 702 ggttgaagtgccctctcattttgttgcactagtcttggagaactgtaatcttccatatgc 761
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 ggttgaagtgccctctcattttgttgacctagtcttggagaactgtaatcttccatatgc 60
Query: 762 aaatcatggacacattatctttggtgatccttcaacaattttaagttatcccattagtag 821
|||| ||||| ||||||| ||||||||||||| ||| | |||||||||||||||||
Sbjct: 61 caatcctggacccattatccttggtgatccttccacagtggggagttatcccattagtag 120
Query: 822 cactgaggttcgctgttttgttgaatt 848
||||||||||| |||||||||||||||
Sbjct: 121 cactgaggttccctgttttgttgaatt 147
>gnl|LJGI|TC63518 similar to UniRef100_Q8GSM9 Cluster: Squalene monooxygenase 2; n=1;
Medicago truncatula|Rep: Squalene monooxygenase 2 -
Medicago truncatula (Barrel medic), partial (45%)
Length = 937
Score = 105 bits (53), Expect = 5e-22
Identities = 451/581 (77%), Gaps = 2/581 (0%)
Strand = Plus / Plus
Query: 191 tcatcattgttggtgctggagttgctggcgcagcccttgcttacacacttggagaggatg 250
||||||||||||| ||||| ||||||||| | ||||| ||| |||| || || ||||||
Sbjct: 339 tcatcattgttggagctggtgttgctggctccgccctggctcacactctcggcaaggatg 398
Query: 251 gacggcgagtgcatgtgattgaaagggacttgaatgaacctgacaggattgttggtgaag 310
|||| ||||||||||| || ||||| || ||| || |||||| | |||||||| ||
Sbjct: 399 gacgtcgagtgcatgttatcgaaagagatctgagcgagcctgaccgaattgttggggagt 458
Query: 311 tactaatacctgggggctatctcaagttaattgagttgggtctggaggattgtttggatg 370
| ||| |||||||||||||||||| ||||| || |||| || || |||||| ||||
Sbjct: 459 tgctacaacctgggggctatctcaaattaatagaactgggacttgaagattgtgtggagc 518
Query: 371 aaattgatgctcagcaaatctttggatatgccttttataaggatgggaaagttgccaagt 430
||||||||||||| | | | ||||| ||||| ||| || |||||||| | |
Sbjct: 519 aaattgatgctcaacgagtgtttggttatgctcttttcaatgatgggaagcatactcgtc 578
Query: 431 tatcttatcctttggaaaaatttgattctcatgtttctgggaaaagctttcacaatggtc 490
| |||||||| ||||| || ||| | || |||||||||| | ||||||||||||||| |
Sbjct: 579 tctcttatcccttggagaagtttcaatcagatgtttctggcagaagctttcacaatggcc 638
Query: 491 gtttcatacagagaatgagaaaaaaggctttatctctaccaaatgtaaaattggaacaag 550
|||| || ||||| ||| || | |||||| ||| || || || ||| ||||||| ||||
Sbjct: 639 gttttattcagaggatgcgagagaaggctgcatcccttcccaacgtacaattggagcaag 698
Query: 551 gaactgttacatctctagttgaagaaaaaggaaccataaaaggggtgcactacaa-aacc 609
|||| || || || || ||||||| || ||||| |||||||| ||||| ||||| |||
Sbjct: 699 gaacggtcacttccttacttgaagagaagggaacaataaaaggtgtgcagtacaagaaca 758
Query: 610 aagagtggacaagaactcatagcaaaggctcccctcaccatagtgtgtgatggttgtttt 669
|||| ||| || ||| | | ||| | |||||||| ||||| || |||||||| |||||
Sbjct: 759 aaga-tggtcaggaattgactgcatatgctccccttaccattgtttgtgatggctgtttc 817
Query: 670 tccaacttgaggcgctctctttgcacccctaaggttgaagtgccctctcattttgttgca 729
|| ||| || | || ||||| || | |||||||||||| | || ||| ||||||||
Sbjct: 818 tcaaacctgcgtcgttctctgtgtaaccctaaggttgatattccatcttgttttgttggc 877
Query: 730 ctagtcttggagaactgtaatcttccatatgcaaatcatgg 770
|||| || ||||||||| | ||||||| ||||||||||||
Sbjct: 878 ttagttttagagaactgtgaacttccatgtgcaaatcatgg 918
>gnl|LJGI|TC58216 similar to UniRef100_Q8GSM8 Cluster: Squalene monooxygenase 1; n=1;
Medicago truncatula|Rep: Squalene monooxygenase 1 -
Medicago truncatula (Barrel medic), partial (59%)
Length = 1180
Score = 85.7 bits (43), Expect = 5e-16
Identities = 388/503 (77%)
Strand = Plus / Plus
Query: 268 attgaaagggacttgaatgaacctgacaggattgttggtgaagtactaatacctgggggc 327
|||||||| || ||| |||||| ||| |||||||||| || | ||| |||||| |||
Sbjct: 402 attgaaagagatctgactgaaccagaccggattgttggagagttgctacaacctggaggc 461
Query: 328 tatctcaagttaattgagttgggtctggaggattgtttggatgaaattgatgctcagcaa 387
|||||||| |||||||| |||| || || |||||| |||| |||||||||| ||||||
Sbjct: 462 tatctcaaattaattgaactgggacttgaagattgtgtggagaaaattgatgcgcagcaa 521
Query: 388 atctttggatatgccttttataaggatgggaaagttgccaagttatcttatcctttggaa 447
||||||||||||| ||| |||||||| ||| | | |||||||| ||||||
Sbjct: 522 gtctttggatatgcgcttttcaaggatggaaaacacacacgactctcttatcccttggaa 581
Query: 448 aaatttgattctcatgtttctgggaaaagctttcacaatggtcgtttcatacagagaatg 507
|| ||| | || || || |||| | ||||||||||||||| ||||| || ||||| |||
Sbjct: 582 aagtttcactcagatattgctggcagaagctttcacaatgggcgttttattcagaggatg 641
Query: 508 agaaaaaaggctttatctctaccaaatgtaaaattggaacaaggaactgttacatctcta 567
||| | || ||| || || | |||||| | ||||| |||||||| ||||| || |||
Sbjct: 642 agacagaaagctgcctccctttccaatgtacatttggagcaaggaacagttacttcccta 701
Query: 568 gttgaagaaaaaggaaccataaaaggggtgcactacaaaaccaagagtggacaagaactc 627
||||||| || || || || ||||| ||||| |||||||| || ||| || ||| |
Sbjct: 702 cttgaagagaagggtacaattaaaggtgtgcagtacaaaacaaaagatggtcaggaatta 761
Query: 628 atagcaaaggctcccctcaccatagtgtgtgatggttgtttttccaacttgaggcgctct 687
||| |||||| || ||||| || |||||||| ||||| || |||||| | ||||||
Sbjct: 762 tcagcgtgggctcctcttaccattgtttgtgatggctgtttctcaaacttgcgtcgctct 821
Query: 688 ctttgcacccctaaggttgaagtgccctctcattttgttgcactagtcttggagaactgt 747
||||| | |||||||| || || |||||| |||||||| |||| |||||||| |||
Sbjct: 822 ctttgtaatcctaaggtagatgttccctcttgttttgttggcttagttttggagaattgt 881
Query: 748 aatcttccatatgcaaatcatgg 770
| ||||||| ||||||||||||
Sbjct: 882 gaacttccatgtgcaaatcatgg 904