Miyakogusa Predicted Gene
- Lj4g3v0409480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0409480.1 tr|G7JU04|G7JU04_MEDTR Glutamyl-tRNA reductase
OS=Medicago truncatula GN=MTR_4g092820 PE=3 SV=1,75.43,0,Glutamyl
tRNA-reductase catalytic, N-terminal domain,Tetrapyrrole biosynthesis,
glutamyl-tRNA reduct,CUFF.47062.1
(1608 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594996 similar to UniRef100_P42804 Cluster: Glutamyl-... 1106 0.0
gnl|LJGI|TC82618 similar to UniRef100_A7QSB1 Cluster: Glutamyl-t... 648 0.0
gnl|LJGI|TC75074 homologue to UniRef100_Q9ZPK4 Cluster: Glutamyl... 105 9e-22
gnl|LJGI|TC57806 similar to UniRef100_Q9ZPK4 Cluster: Glutamyl-t... 76 8e-13
gnl|LJGI|FS338750 similar to UniRef100_Q9ZPK4 Cluster: Glutamyl-... 70 5e-11
gnl|LJGI|AV428860 homologue to UniRef100_P42804 Cluster: Glutamy... 58 2e-07
>gnl|LJGI|DC594996 similar to UniRef100_P42804 Cluster: Glutamyl-tRNA reductase 1,
chloroplast precursor; n=1; Arabidopsis thaliana|Rep:
Glutamyl-tRNA reductase 1, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (22%)
Length = 575
Score = 1106 bits (558), Expect = 0.0
Identities = 568/570 (99%), Gaps = 1/570 (0%)
Strand = Plus / Plus
Query: 1 atggcggccgtggatgtttcctccgccgccgccactatcaccgccgcgcttccctcctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 atggcggccgtggatgtttcctccgccgccgccactatcaccgccgcgcttccctcctcc 65
Query: 61 cgccgctgtccttctcaaccgcccaatcaaatccgcatcctctccaaaccctcctcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 cgccgctgtccttctcaaccgcccaatcaaatccgcatcctctccaaaccctcctcctca 125
Query: 121 acccttcgactctctctcaaccccagatgcag-caacctcgcgcaaaatccagtccccaa 179
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 126 acccttcgactctctctcaaccccagatgcaggcaacctcgcgcaaagtccagtccccaa 185
Query: 180 aaacgccgtcgtttccaagctttcccctctcgagttgctcaagtcttccgccgccgacag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 aaacgccgtcgtttccaagctttcccctctcgagttgctcaagtcttccgccgccgacag 245
Query: 240 atatacgaaggaaaagagtagcatcattgccattggactgaatgttcatactgctccggt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atatacgaaggaaaagagtagcatcattgccattggactgaatgttcatactgctccggt 305
Query: 300 tgagctacgtgagaagcttgcgatcgctgaagagaaatggcctcaggtgattgaagagct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgagctacgtgagaagcttgcgatcgctgaagagaaatggcctcaggtgattgaagagct 365
Query: 360 ttgtggtttgaatcatattgaagaagctgctgttcttagcacttgtaaccggattgagat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttgtggtttgaatcatattgaagaagctgctgttcttagcacttgtaaccggattgagat 425
Query: 420 ttatgttgtggctctctcccagaatcgtggtgttagggaagtcactcagtggatgtcaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttatgttgtggctctctcccagaatcgtggtgttagggaagtcactcagtggatgtcaaa 485
Query: 480 gatgagtggggttccaataccagagctccaggagcaccagatgttgctgtataacaagga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gatgagtggggttccaataccagagctccaggagcaccagatgttgctgtataacaagga 545
Query: 540 tgccacacagcatttgtttgaagtagctgc 569
||||||||||||||||||||||||||||||
Sbjct: 546 tgccacacagcatttgtttgaagtagctgc 575
>gnl|LJGI|TC82618 similar to UniRef100_A7QSB1 Cluster: Glutamyl-tRNA reductase; n=1;
Vitis vinifera|Rep: Glutamyl-tRNA reductase - Vitis
vinifera (Grape), partial (19%)
Length = 635
Score = 648 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Plus
Query: 1282 gactccttggaaactgtacctactattaagaaatttagagcttatgctgaaaggattagt 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gactccttggaaactgtacctactattaagaaatttagagcttatgctgaaaggattagt 60
Query: 1342 tcctctgaggtggagaagtgtttgtcgaagatgggtaatgacatctcaaaggagcaaaaa 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctctgaggtggagaagtgtttgtcgaagatgggtaatgacatctcaaaggagcaaaaa 120
Query: 1402 gatgcaatatattcacttggtatgggcattgtgaataagcttcttcacggtcctatgcag 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgcaatatattcacttggtatgggcattgtgaataagcttcttcacggtcctatgcag 180
Query: 1462 catttgaggtgtgatgggaatgataatcgttgtttgagtgaagtactcgagaatatgcgc 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catttgaggtgtgatgggaatgataatcgttgtttgagtgaagtactcgagaatatgcgc 240
Query: 1522 gctcttaacagaatgtatgatcttgagacagaaacttccttgatagaagaaaagatcaaa 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctcttaacagaatgtatgatcttgagacagaaacttccttgatagaagaaaagatcaaa 300
Query: 1582 gccaagatggaacgggttcaaaagtaa 1608
|||||||||||||||||||||||||||
Sbjct: 301 gccaagatggaacgggttcaaaagtaa 327
>gnl|LJGI|TC75074 homologue to UniRef100_Q9ZPK4 Cluster: Glutamyl-tRNA reductase;
n=1; Glycine max|Rep: Glutamyl-tRNA reductase - Glycine
max (Soybean), partial (24%)
Length = 604
Score = 105 bits (53), Expect = 9e-22
Identities = 107/125 (85%)
Strand = Plus / Plus
Query: 355 gagctttgtggtttgaatcatattgaagaagctgctgttcttagcacttgtaaccggatt 414
|||||||| || ||||||||||||||||||| |||||||| ||||| || ||||| ||
Sbjct: 445 gagctttgcagtctgaatcatattgaagaagcagctgttctgagcacctgcaaccgaatg 504
Query: 415 gagatttatgttgtggctctctcccagaatcgtggtgttagggaagtcactcagtggatg 474
||||| |||||||| |||||||||||| | |||||||| | ||||||||| | ||||||
Sbjct: 505 gagatatatgttgtagctctctcccagcaccgtggtgtcaaagaagtcactgaatggatg 564
Query: 475 tcaaa 479
|||||
Sbjct: 565 tcaaa 569
>gnl|LJGI|TC57806 similar to UniRef100_Q9ZPK4 Cluster: Glutamyl-tRNA reductase; n=1;
Glycine max|Rep: Glutamyl-tRNA reductase - Glycine max
(Soybean), partial (90%)
Length = 2165
Score = 75.8 bits (38), Expect = 8e-13
Identities = 187/234 (79%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 532 aacaaggatgccacacagcatttgtttgaagtagctgctgggcttgactcccttgttcta 591
||||| ||||| ||||||||| | ||||||||| | || || |||||||| ||||| |
Sbjct: 705 aacaaagatgcgacacagcatatttttgaagtatcagcaggtcttgactctcttgtattg 764
Query: 592 ggggagggtcagattcttgctcaggtgaagcaagttgtgaaaactggacaaggagtgtct 651
|| || ||||| || ||||||||||| ||||||||||| ||| |||||||||||| ||
Sbjct: 765 ggagaaggtcaaatccttgctcaggttaagcaagttgttaaagttggacaaggagttact 824
Query: 652 ggttttggtcagatgatgagtgggatgttcaagcaggcaatctctgccgggaagcgggtt 711
|| ||||| | || |||||| | |||||||| ||||| ||| |||||| |||||
Sbjct: 825 ggctttgggagaaacattagtgggctattcaagcatgcaattactgtcgggaaaagggtt 884
Query: 712 cggagc-gagactaacattgcttctggatcagtttctgttagctctgctgctgt 764
|||| |||||||| |||||| |||| |||||||||| ||||| ||||||||
Sbjct: 885 -agagctgagactaatattgctgctggggcagtttctgtaagctcagctgctgt 937
Score = 69.9 bits (35), Expect = 5e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 370 aatcatattgaagaagctgctgttcttagcacttgtaaccggattgagatttatgttgtg 429
||||||||||||||||| |||||||||||||| || || || || ||||| ||||||||
Sbjct: 543 aatcatattgaagaagcagctgttcttagcacctgcaatcgaatggagatatatgttgtt 602
Query: 430 gctctctccca 440
||||| |||||
Sbjct: 603 gctctttccca 613
Score = 63.9 bits (32), Expect = 3e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 1267 ttcgaagcgtggaaagactccttggaaactgtacctactattaagaaatttagagcttat 1326
|||||||| |||| ||||| |||||||||| |||||||| |||||||| || ||||||
Sbjct: 1440 ttcgaagcctggagggactcgctggaaactgttcctactatcaagaaattgagggcttat 1499
Query: 1327 gctgaaag 1334
||||||||
Sbjct: 1500 gctgaaag 1507
>gnl|LJGI|FS338750 similar to UniRef100_Q9ZPK4 Cluster: Glutamyl-tRNA reductase; n=1;
Glycine max|Rep: Glutamyl-tRNA reductase - Glycine max
(Soybean), partial (20%)
Length = 700
Score = 69.9 bits (35), Expect = 5e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 370 aatcatattgaagaagctgctgttcttagcacttgtaaccggattgagatttatgttgtg 429
||||||||||||||||| |||||||||||||| || || || || ||||| ||||||||
Sbjct: 608 aatcatattgaagaagcagctgttcttagcacctgcaatcgaatggagatatatgttgtt 667
Query: 430 gctctctccca 440
||||| |||||
Sbjct: 668 gctctttccca 678
>gnl|LJGI|AV428860 homologue to UniRef100_P42804 Cluster: Glutamyl-tRNA reductase 1,
chloroplast precursor; n=1; Arabidopsis thaliana|Rep:
Glutamyl-tRNA reductase 1, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (15%)
Length = 248
Score = 58.0 bits (29), Expect = 2e-07
Identities = 101/125 (80%)
Strand = Plus / Plus
Query: 523 ttgctgtataacaaggatgccacacagcatttgtttgaagtagctgctgggcttgactcc 582
||||| || ||||| ||||| |||||||| | ||||||||| | | || ||||||||
Sbjct: 1 ttgctttacaacaaagatgcaacacagcacatttttgaagtatcaacaggtcttgactct 60
Query: 583 cttgttctaggggagggtcagattcttgctcaggtgaagcaagttgtgaaaactggacaa 642
|||||| | || || | ||||| ||||| ||||| ||||||||||| ||| ||||||||
Sbjct: 61 cttgttatgggagaaagccagatccttgcacaggtcaagcaagttgtcaaagctggacaa 120
Query: 643 ggagt 647
|||||
Sbjct: 121 ggagt 125