Miyakogusa Predicted Gene

Lj4g3v0388240.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0388240.1 Non Chatacterized Hit- tr|G7JV29|G7JV29_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.41,8e-17,zf-met,NULL; ZINC_FINGER_C2H2_1,Zinc finger,
C2H2; C2H2 and C2HC zinc fingers,NULL; U1-like zinc fin,CUFF.47042.1
         (538 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV772555                                                     157   9e-38

>gnl|LJGI|AV772555 
          Length = 463

 Score =  157 bits (79), Expect = 9e-38
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                       
Query: 81  tgaagagtttccttggagttctacacataaggaagtccagaaagagtggacttgcgcttt 140
           |||||||||||||  |||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 463 tgaagagtttcctcagagttctatacataaggaagtgcagaaagagtggacttgcgcttt 404

                                                                       
Query: 141 atgtcaggtaacagtttcgagggaggaagacttgaattcccacctacaagggaggaaaca 200
           |||||||||| ||| |||||| ||| || ||||||||| ||||||||| |||| | ||||
Sbjct: 403 atgtcaggtatcagcttcgagcgagaaaaacttgaatttccacctacatgggaaggaaca 344

                                      
Query: 201 tagggctgctgatgaagctataaaagc 227
            ||| ||||| |||||||| |||||||
Sbjct: 343 caggcctgctcatgaagctctaaaagc 317