Miyakogusa Predicted Gene

Lj4g3v0386050.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0386050.1 Non Chatacterized Hit- tr|I1KL59|I1KL59_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,77.22,0,Glucocorticoid receptor-like (DNA-binding domain),NULL;
GATA_ZN_FINGER_2,Zinc finger, GATA-type; CCT,CUFF.47035.1
         (1074 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68035 similar to UniRef100_A7QM28 Cluster: Chromosome...    84   2e-15
gnl|LJGI|FS360985 homologue to UniRef100_A7Q479 Cluster: Chromos...    72   8e-12

>gnl|LJGI|TC68035 similar to UniRef100_A7QM28 Cluster: Chromosome undetermined
           scaffold_123, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_123,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (46%)
          Length = 1631

 Score = 83.8 bits (42), Expect = 2e-15
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 391 aggtttcgtgaaaaacgaaaagagagatgttttgagaagaaaattcggtatacttgccgt 450
           ||||| ||||||||||| || || ||||||||||| ||||||||| |||| ||     | 
Sbjct: 514 aggttccgtgaaaaacgcaaggaaagatgttttgacaagaaaattaggtacaccgtgaga 573

                                                                     
Query: 451 aaagaggttgcccagaggatgcatcgtaagaatggacaatttgcatcattgaaggaag 508
           |||||||| || |||||||||||||| |||||||| || |||||||| ||||||||||
Sbjct: 574 aaagaggtggcacagaggatgcatcggaagaatggccagtttgcatccttgaaggaag 631


>gnl|LJGI|FS360985 homologue to UniRef100_A7Q479 Cluster: Chromosome chr9 scaffold_49,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_49, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 448

 Score = 71.9 bits (36), Expect = 8e-12
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                       
Query: 655 tgcaatgcctgtgggcttatgtgggcaaataagggaactctgag 698
           |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 360 tgcaatgcttgtggacttatgtgggcaaataagggaactctgag 317