Miyakogusa Predicted Gene

Lj4g3v0385840.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0385840.1 Non Chatacterized Hit- tr|H9VI41|H9VI41_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,63.64,4e-17,coiled-coil,NULL; COPI_assoc,Golgi apparatus membrane
protein TVP15; seg,NULL,CUFF.47026.1
         (594 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64672                                                     1178   0.0  

>gnl|LJGI|TC64672 
          Length = 957

 Score = 1178 bits (594), Expect = 0.0
 Identities = 594/594 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccagaaacggcgaggtagaggaagaggaagaggaagagaatctcgtcgccaccgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  atggccagaaacggcgaggtagaggaagaggaagaggaagagaatctcgtcgccaccgcc 136

                                                                       
Query: 61  acaaccaccggaacgagagccagaacagacccgttcttagtaacctgcaagtgcttcagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 acaaccaccggaacgagagccagaacagacccgttcttagtaacctgcaagtgcttcagc 196

                                                                       
Query: 121 gtcatcacctctttggctgccattctctgcatcgccgtcaatgtcctctccgctgttcgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gtcatcacctctttggctgccattctctgcatcgccgtcaatgtcctctccgctgttcgt 256

                                                                       
Query: 181 tccttcaaaaacgcatctgatattttcgatggtatttttcgctgttacgcggttgtgatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tccttcaaaaacgcatctgatattttcgatggtatttttcgctgttacgcggttgtgatt 316

                                                                       
Query: 241 gcagctttcgttgtcctcgctgagactgagtggagtttcatcatcaaattctctcaggtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gcagctttcgttgtcctcgctgagactgagtggagtttcatcatcaaattctctcaggtt 376

                                                                       
Query: 301 ttggagtattgggctgcaaggggcatgctgcaaatctttgttggagtcatgacaagggct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttggagtattgggctgcaaggggcatgctgcaaatctttgttggagtcatgacaagggct 436

                                                                       
Query: 361 ttccctgactatactagggcgcgcgagtggattattcttcttcagaacatagcgagctat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttccctgactatactagggcgcgcgagtggattattcttcttcagaacatagcgagctat 496

                                                                       
Query: 421 ttgcttcttgcatgtggctttgtttatcttatttcaggagtcctgtgcattggttttctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttgcttcttgcatgtggctttgtttatcttatttcaggagtcctgtgcattggttttctt 556

                                                                       
Query: 481 aaacgtgctcgtcagaagcaggcaattacaacagagcaagcagccaaggatttggaggaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaacgtgctcgtcagaagcaggcaattacaacagagcaagcagccaaggatttggaggaa 616

                                                                 
Query: 541 ttggaacggcgcaaagcggaacttgaacaactactccttgcagaaagagtttaa 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttggaacggcgcaaagcggaacttgaacaactactccttgcagaaagagtttaa 670