Miyakogusa Predicted Gene

Lj4g3v0385820.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0385820.1 Non Chatacterized Hit- tr|K4AFG9|K4AFG9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si037626,44.83,3e-18,seg,NULL; DUF565,Uncharacterised protein
family Ycf20,CUFF.47025.1
         (627 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO026107 homologue to UniRef100_A7R4B3 Cluster: Chromos...  1003   0.0  

>gnl|LJGI|GO026107 homologue to UniRef100_A7R4B3 Cluster: Chromosome undetermined
           scaffold_644, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_644,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (36%)
          Length = 677

 Score = 1003 bits (506), Expect = 0.0
 Identities = 516/518 (99%), Gaps = 1/518 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttgtcaaatgggatctatgaatctgcagtggagattatcaattacagagcatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atggcttgtcaaatgggatctatgaatctgcagtggagattatcaattacagagcatgaa 220

                                                                       
Query: 61  agctctaaaaaaccatatacagccttttcagcttcaagggttcatggttgttgctgtgag 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 221 agctctaaaaaaccatatacagccttttcagcttcaagggttcatggttgttactgtgag 280

                                                                       
Query: 121 ccaattcttagtggactaacttctaatgctggcgggaagtcttcacattttcctcagagc 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 281 ccaattcttagtggactaacttctaatgctggcgggaagtcttcacattt-cctcagagc 339

                                                                       
Query: 181 ggtttcctggggagaaaagctgtgtggaaaatagcttttgccttgaacacaggtggagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggtttcctggggagaaaagctgtgtggaaaatagcttttgccttgaacacaggtggagtg 399

                                                                       
Query: 241 cctggtaacggtgagcaacaaagtctcaacgataccagttccagttttggcggcactcga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cctggtaacggtgagcaacaaagtctcaacgataccagttccagttttggcggcactcga 459

                                                                       
Query: 301 ttgggtaggatactgtctgcaggtggcagacaacttctagataagctgaactctgcgagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttgggtaggatactgtctgcaggtggcagacaacttctagataagctgaactctgcgagg 519

                                                                       
Query: 361 aagaacgtccctatgaaaatattcctgctacttttgggtttctacacggcaaacgcacta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aagaacgtccctatgaaaatattcctgctacttttgggtttctacacggcaaacgcacta 579

                                                                       
Query: 421 gctacaatcctcgggcaaactggtgattgggatgttctggttgctggtgttgtggtggct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gctacaatcctcgggcaaactggtgattgggatgttctggttgctggtgttgtggtggct 639

                                                 
Query: 481 gccattgagggaattggtatgctactatatcgaaagcc 518
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gccattgagggaattggtatgctactatatcgaaagcc 677