Miyakogusa Predicted Gene
- Lj4g3v0385800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0385800.1 Non Chatacterized Hit- tr|I1KL47|I1KL47_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.05,0,GDI,GDP
dissociation inhibitor; RAB GDP-DISSOCIATION INHIBITOR,NULL; no
description,NULL; RABGDIREP,,CUFF.47022.1
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66978 homologue to UniRef100_O65744 Cluster: GDP diss... 84 1e-15
gnl|LJGI|TC60198 homologue to UniRef100_O65744 Cluster: GDP diss... 66 3e-10
>gnl|LJGI|TC66978 homologue to UniRef100_O65744 Cluster: GDP dissociation inhibitor;
n=1; Cicer arietinum|Rep: GDP dissociation inhibitor -
Cicer arietinum (Chickpea) (Garbanzo), partial (95%)
Length = 1556
Score = 83.8 bits (42), Expect = 1e-15
Identities = 135/166 (81%)
Strand = Plus / Plus
Query: 395 agagaatcaaggtttatgcagagtccctagctcgctttcaaggaggttcaccttacatat 454
||||||| ||| | ||||||||||| || || ||||||||||| || |||||||||||||
Sbjct: 551 agagaatgaagttatatgcagagtctcttgcacgctttcaagggggatcaccttacatat 610
Query: 455 atccactatatgggctgggagagttgcctcaggcatttgcccgtttgagtgctgtgtatg 514
|||| | ||||| | || || | || |||| ||||| || | |||||||| ||||
Sbjct: 611 atcctttgtatggtttaggggaacttccccagggttttgcacggcttagtgctgtttatg 670
Query: 515 gtggaacatacatgctgaacaagccagaatgcaaggtagagtttga 560
|||||||||||||| |||| || || ||||||||||| ||||||||
Sbjct: 671 gtggaacatacatgttgaataaacctgaatgcaaggttgagtttga 716
Score = 65.9 bits (33), Expect = 3e-10
Identities = 147/185 (79%)
Strand = Plus / Plus
Query: 43 gttctcatccacacagatgttacaaagtatttgaacttcaaagctgtagatggaagcttt 102
|||||||| || || |||||||| |||||| | | ||||||||||| ||||| ||||||
Sbjct: 199 gttctcattcatactgatgttaccaagtatctatatttcaaagctgtggatgggagcttt 258
Query: 103 gtctataataaaggaaagatatacaaagttccagcaacagatgttgaagccctcaagtcc 162
|||| ||| ||||||||| | |||| || || ||| || | || ||| | ||||||
Sbjct: 259 gtctttaacaaaggaaaggttcacaaggtgccttcaaatgacatggaggccttgaagtcc 318
Query: 163 cctttaatgggactgtttgagaagcgccgtgctcggaagttcttcatttatgtccaagat 222
|| | |||||| | ||||| || ||||| || || ||||||||||||||||| ||||||
Sbjct: 319 ccgcttatgggaatatttgaaaaacgccgggcccgcaagttcttcatttatgttcaagat 378
Query: 223 tatga 227
|||||
Sbjct: 379 tatga 383
>gnl|LJGI|TC60198 homologue to UniRef100_O65744 Cluster: GDP dissociation inhibitor;
n=1; Cicer arietinum|Rep: GDP dissociation inhibitor -
Cicer arietinum (Chickpea) (Garbanzo), partial (52%)
Length = 892
Score = 65.9 bits (33), Expect = 3e-10
Identities = 147/185 (79%)
Strand = Plus / Plus
Query: 43 gttctcatccacacagatgttacaaagtatttgaacttcaaagctgtagatggaagcttt 102
|||||||| || || |||||||| |||||| | | ||||||||||| ||||| ||||||
Sbjct: 465 gttctcattcatactgatgttaccaagtatctatatttcaaagctgtggatgggagcttt 524
Query: 103 gtctataataaaggaaagatatacaaagttccagcaacagatgttgaagccctcaagtcc 162
|||| ||| ||||||||| | |||| || || ||| || | || ||| | ||||||
Sbjct: 525 gtctttaacaaaggaaaggttcacaaggtgccttcaaatgacatggaggccttgaagtcc 584
Query: 163 cctttaatgggactgtttgagaagcgccgtgctcggaagttcttcatttatgtccaagat 222
|| | |||||| | ||||| || ||||| || || ||||||||||||||||| ||||||
Sbjct: 585 ccgcttatgggaatatttgaaaaacgccgggcccgcaagttcttcatttatgttcaagat 644
Query: 223 tatga 227
|||||
Sbjct: 645 tatga 649
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 395 agagaatcaaggtttatgcagagtccctagctcgctttcaaggaggttcaccttacatat 454
||||||| ||| | ||||||||||| || || ||||||||||| || |||||||||||||
Sbjct: 817 agagaatgaagttatatgcagagtctcttgcacgctttcaagggggatcaccttacatat 876
Query: 455 atcc 458
||||
Sbjct: 877 atcc 880