Miyakogusa Predicted Gene
- Lj4g3v0365710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0365710.1 Non Chatacterized Hit- tr|Q84NQ5|Q84NQ5_ORYSJ
Putative uncharacterized protein P0034A04.119
OS=Oryza,29.36,1e-16,seg,NULL,CUFF.47017.1
(1258 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320759 weakly similar to UniRef100_A7PJ20 Cluster: Ch... 517 e-146
gnl|LJGI|TC60444 similar to UniRef100_A7NUN6 Cluster: Chromosome... 283 1e-75
>gnl|LJGI|FS320759 weakly similar to UniRef100_A7PJ20 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 729
Score = 517 bits (261), Expect = e-146
Identities = 261/261 (100%)
Strand = Plus / Plus
Query: 1 atgggtatgcagcatttgcacggtggaagtagggttgcattgaattctgaggctgttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atgggtatgcagcatttgcacggtggaagtagggttgcattgaattctgaggctgttttg 528
Query: 61 gtgatcaaggttcctgatgcgcaggttttgagaattgtgtcacggtctttgtttctggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtgatcaaggttcctgatgcgcaggttttgagaattgtgtcacggtctttgtttctggct 588
Query: 121 ctggtttttgccaccttgcctttcttggggtcctttttgaatggttcagttgtttctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ctggtttttgccaccttgcctttcttggggtcctttttgaatggttcagttgtttctgaa 648
Query: 181 tttgctgctaaatctgggtcatctatcaatgttgaggtattgggtttgattctccatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tttgctgctaaatctgggtcatctatcaatgttgaggtattgggtttgattctccatgat 708
Query: 241 ttgggtgaggaaggccttctc 261
|||||||||||||||||||||
Sbjct: 709 ttgggtgaggaaggccttctc 729
>gnl|LJGI|TC60444 similar to UniRef100_A7NUN6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1266
Score = 283 bits (143), Expect = 1e-75
Identities = 220/245 (89%), Gaps = 3/245 (1%)
Strand = Plus / Plus
Query: 1017 ttggttatctaagcatgtgaaggaggaagagtatgttgtgatgaaggcagaagcagctgt 1076
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 904 ttggttatctaagcatgtgaaggaggaagagtatgttgtgatgaaggcagaagcagaggt 963
Query: 1077 ggttgaggagatgatgaagaaaaggacaatctacttagtggatgaactgttcctcgagtg 1136
|| ||||||||||| ||| ||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 964 tgtggaggagatgataaaggaaaggacaatctatttggtggatgaactcttcctagagtg 1023
Query: 1137 caacaatgaatggtggc---aaactgggaagcaaaagaaaagtaggagagcttattggga 1193
|| ||||||||||||| | | |||||| |||||| ||||||||||| ||||||||
Sbjct: 1024 taagaatgaatggtggcagaagaaggggaagagaaagaagagtaggagagcatattggga 1083
Query: 1194 gtgcttggctttgtatggaaggttgagggatgagggagttgcagtacatcaatggtgggg 1253
|||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||
Sbjct: 1084 gtgcttggctttgtatggaaggctgagggatgagggagttgcagtgcaccaatggtgggg 1143
Query: 1254 ttgaa 1258
|||||
Sbjct: 1144 ttgaa 1148
Score = 85.7 bits (43), Expect = 6e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 804 gaagatcaagtacctacctgagttattggatgattctcttgaagggtacaagcgaagagt 863
|||||||||||| ||||||||||| |||| ||||||||||||||| ||||| |||||| |
Sbjct: 706 gaagatcaagtatctacctgagttgttgggtgattctcttgaaggttacaatcgaagact 765
Query: 864 cttcatt 870
|||||||
Sbjct: 766 cttcatt 772