Miyakogusa Predicted Gene
- Lj4g3v0365660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0365660.1 Non Chatacterized Hit- tr|B9G1G0|B9G1G0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,44.16,0.000000000009,seg,NULL; Clavaminate synthase-like,NULL;
FE2OG_OXY,Oxoglutarate/iron-dependent dioxygenase; no
desc,CUFF.47149.1
(1338 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79320 weakly similar to UniRef100_A7Q671 Cluster: Chr... 739 0.0
gnl|LJGI|AV766451 222 4e-57
>gnl|LJGI|TC79320 weakly similar to UniRef100_A7Q671 Cluster: Chromosome undetermined
scaffold_55, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_55, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 412
Score = 739 bits (373), Expect = 0.0
Identities = 399/412 (96%)
Strand = Plus / Plus
Query: 269 ttggccaaaactccaacatgagaatcaaattcacaagcgtgaaagcactagctgaatcac 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggccaaaactccaacatgagaatcaaattcacaagcgtgaaagcactagctgaatcac 60
Query: 329 cagacctcacctcaattccaccttcatacaccttcaccaccaaccgtgatgatgaaacag 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagacctcacctcaattccaccttcatacaccttcaccaccaaccgtgatgatgaaacag 120
Query: 389 tggcagcagacccaggtgatgatgatccaatcccagccattgattattcccttctggtcc 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcagcagacccaggtgatgatgatccaatcccagccattgattattcccttctggtcc 180
Query: 449 acggaacaccagatcaacggctcaggaccatccatgatatgggcaaggcttgtgagaaat 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acggaacaccagatcaacggctcaggaccatccatgatatgggcaaggcttgtgagaaat 240
Query: 509 ggggactcttcatgctggtaaatcattctgtgtcaaagagccttgtggagaagatggttg 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggggactcttcatgctggtaaatcattctgtgtcaaagagccttgtggagaagatggttg 300
Query: 569 atgaggnnnnnnnnnnnnncaatcttagagaggaggagaagcaggagtatgcaggtaata 628
|||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaggtttttgcttttttcaatcttagagaggaggagaagcaggagtatgcaggtaata 360
Query: 629 aggatgtgatggagcctataaggtatggcaccagcttcaatgttgcaatgga 680
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggatgtgatggagcctataaggtatggcaccagcttcaatgttgcaatgga 412
>gnl|LJGI|AV766451
Length = 271
Score = 222 bits (112), Expect = 4e-57
Identities = 130/136 (95%)
Strand = Plus / Minus
Query: 1203 accagcttcagagctgctagacaatcagagcaatccagcagcatatgttggcatgagaca 1262
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 271 accagcttcagagttggtagacaatcagagcaatccagcagcatatgttggcatgggaca 212
Query: 1263 tagagattacatggaacttcaacgaagcaaccagctttatgggaagtctgtgctgaacaa 1322
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 211 taaagattacatggaacttcaacgaagcaaccagctttatgggaagtctgtgctgaccaa 152
Query: 1323 agttaaaatatgaatg 1338
|||||||||| |||||
Sbjct: 151 agttaaaataagaatg 136