Miyakogusa Predicted Gene

Lj4g3v0363540.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0363540.1 Non Chatacterized Hit- tr|B9S918|B9S918_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,38.82,0.00000005,coiled-coil,NULL; seg,NULL,CUFF.47014.1
         (519 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63487                                                      928   0.0  

>gnl|LJGI|TC63487 
          Length = 714

 Score =  928 bits (468), Expect = 0.0
 Identities = 502/519 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagaatacacagaggacattaaagactgggaacaaatcgagcaacacccatctccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  atggaagaatacacagaggacattaaagactgggaacaaatcgagcaacacccatctccc 152

                                                                       
Query: 61  gaaaccacctctgagtggaacatggtgaccaagatcaacaaaagctacctcaacgttcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 gaaaccacctctgagtggaacatggtgaccaagatcaacaaaagctacctcaacgttcat 212

                                                                       
Query: 121 gatcaccaannnnnnnnnnnnnnnnncacggcgtcgactaatgaattgggtgggaccggg 180
           |||||||||                 ||||||||||||||||||||||||||||||||||
Sbjct: 213 gatcaccaatcttcttcttcttcttccacggcgtcgactaatgaattgggtgggaccggg 272

                                                                       
Query: 181 accccagcgccgccgccaccacatttggattggtggagacgggtggcctatgaagggaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 accccagcgccgccgccaccacatttggattggtggagacgggtggcctatgaagggaag 332

                                                                       
Query: 241 aagctgctcgaggctgtaagggtggttggtaatagtgcggtgtgttcggggacattttgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aagctgctcgaggctgtaagggtggttggtaatagtgcggtgtgttcggggacattttgg 392

                                                                       
Query: 301 tcaattacgtgtgtcgcagcagcggctgcagtgttggtggcggtggagattcgaaggcgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcaattacgtgtgtcgcagcagcggctgcagtgttggtggcggtggagattcgaaggcgt 452

                                                                       
Query: 361 caccggaggcctggtcggagaagcgtagatcatgcggtttgtcttctcagagagaaagac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 caccggaggcctggtcggagaagcgtagatcatgcggtttgtcttctcagagagaaagac 512

                                                                       
Query: 421 gagagaattagtcaactcttacttcagattgcacaactcaatgaagtattattatcacgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gagagaattagtcaactcttacttcagattgcacaactcaatgaagtattattatcacgt 572

                                                  
Query: 481 cgtcaggttccagtgcatcgaatcggcaactcatgatac 519
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cgtcaggttccagtgcatcgaatcggcaactcatgatac 611