Miyakogusa Predicted Gene
- Lj4g3v0343310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0343310.1 Non Chatacterized Hit- tr|I1KR14|I1KR14_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,87.61,0,ATP-BINDING CASSETTE TRANSPORTER PLANT,NULL; ATP-BINDING
CASSETTE TRANSPORTER,NULL; no description,N,CUFF.46986.1
(342 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64586 similar to UniRef100_A7QT46 Cluster: Chromosome... 444 e-124
gnl|LJGI|FS333870 similar to UniRef100_A7QT48 Cluster: Chromosom... 428 e-120
gnl|LJGI|FS327220 similar to UniRef100_A7QT46 Cluster: Chromosom... 289 6e-78
gnl|LJGI|AV416268 similar to UniRef100_A7R4N0 Cluster: Chromosom... 74 6e-13
gnl|LJGI|TC57804 similar to UniRef100_A7QT46 Cluster: Chromosome... 52 2e-06
>gnl|LJGI|TC64586 similar to UniRef100_A7QT46 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 690
Score = 444 bits (224), Expect = e-124
Identities = 284/304 (93%)
Strand = Plus / Plus
Query: 1 atgggaccctctggttgtggaaaatctacacttcttgatgctttagcaggtagattaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgggaccctctggttgtggaaaatctacacttcttgatgctttagcaggtagattaagc 326
Query: 61 tccaaaacaaaacaaacaggggagattctggtcaatggtaacaaacaagctctggcttat 120
|| || | |||||||||||||||||||||| ||||||||||||||||||| ||||| |||
Sbjct: 327 tcaaacataaaacaaacaggggagattctgatcaatggtaacaaacaagcactggcatat 386
Query: 121 ggaacctcggcatatgtgacacaagatgataccttaatgacaaccttaacagttagagaa 180
||||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 387 ggaacctcgacatatgtcacacaagatgaaatcttaatgacaaccttaacagttagagaa 446
Query: 181 gcagttcattattcagctaaacttcagttgcctgataccctttccaaggaagagaagaaa 240
||||| |||||||||||| ||||||| |||||||||||| | ||||||||||||||||||
Sbjct: 447 gcagtgcattattcagctcaacttcaattgcctgataccatgtccaaggaagagaagaaa 506
Query: 241 gagagagcagagttcacaatcagagaaatgggtctccaagatgtcgtcaacacaagaatt 300
||||||||||| ||||||||||||||||||||||| ||||||| | | ||||||||||||
Sbjct: 507 gagagagcagacttcacaatcagagaaatgggtctgcaagatgccattaacacaagaatt 566
Query: 301 ggag 304
||||
Sbjct: 567 ggag 570
>gnl|LJGI|FS333870 similar to UniRef100_A7QT48 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 693
Score = 428 bits (216), Expect = e-120
Identities = 309/340 (90%)
Strand = Plus / Plus
Query: 1 atgggaccctctggttgtggaaaatctacacttcttgatgctttagcaggtagattaagc 60
||||| || ||||||||||| |||||||||||||| |||||| | ||||| ||||||||
Sbjct: 354 atgggtccttctggttgtgggaaatctacacttctcgatgctctggcagggagattaagt 413
Query: 61 tccaaaacaaaacaaacaggggagattctggtcaatggtaacaaacaagctctggcttat 120
|| || |||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 414 tcaaacacaaaacaaacaggggagattctgatcaatggtaacaaacaagcactggcttat 473
Query: 121 ggaacctcggcatatgtgacacaagatgataccttaatgacaaccttaacagttagagaa 180
||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||||
Sbjct: 474 ggaacttcggcatatgtgacacaagatgatacctgaatgacaaccttaacagtaaaagaa 533
Query: 181 gcagttcattattcagctaaacttcagttgcctgataccctttccaaggaagagaagaaa 240
||||| |||||||||||| ||||||| ||||||||| || | ||||||| ||||||||||
Sbjct: 534 gcagtgcattattcagctcaacttcaattgcctgattccatgtccaaggcagagaagaaa 593
Query: 241 gagagagcagagttcacaatcagagaaatgggtctccaagatgtcgtcaacacaagaatt 300
|||||||||||||| |||||||||||||||||||| ||||||| | | |||||| |||||
Sbjct: 594 gagagagcagagtttacaatcagagaaatgggtctgcaagatgccattaacacacgaatt 653
Query: 301 ggaggttggggaattaaaggcattagcggcggtcagaaaa 340
|||||||||||||||||||| ||||| |||||||||||||
Sbjct: 654 ggaggttggggaattaaaggaattagtggcggtcagaaaa 693
>gnl|LJGI|FS327220 similar to UniRef100_A7QT46 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 769
Score = 289 bits (146), Expect = 6e-78
Identities = 197/214 (92%)
Strand = Plus / Plus
Query: 129 ggcatatgtgacacaagatgataccttaatgacaaccttaacagttagagaagcagttca 188
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||
Sbjct: 402 ggcatatgtgacacaagatgataccttaatgacaaccttaacagtaaaagaagcagtgca 461
Query: 189 ttattcagctaaacttcagttgcctgataccctttccaaggaagagaagaaagagagagc 248
|||||||||| ||||||| ||||||||| || | ||||||| ||||||||||||||||||
Sbjct: 462 ttattcagctcaacttcaattgcctgattccatgtccaaggcagagaagaaagagagagc 521
Query: 249 agagttcacaatcagagaaatgggtctccaagatgtcgtcaacacaagaattggaggttg 308
|||||| |||||||||||||||||||| ||||||| | | |||||| |||||||||||||
Sbjct: 522 agagtttacaatcagagaaatgggtctgcaagatgccattaacacacgaattggaggttg 581
Query: 309 gggaattaaaggcattagcggcggtcagaaaagg 342
|||||||||||| ||||| |||||||||||||||
Sbjct: 582 gggaattaaaggaattagtggcggtcagaaaagg 615
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 atgggaccctctggttgtggaaaatctacacttcttgatgct 42
||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 354 atgggtccttctggttgtgggaaatctacacttctcgatgct 395
>gnl|LJGI|AV416268 similar to UniRef100_A7R4N0 Cluster: Chromosome undetermined
scaffold_744, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_744,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 424
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 240 agagagagcagagttcacaatcagagaaatgggtctccaagatgtcgtcaacacaagaat 299
|||||||||||| |||||||||| ||||||||||| ||||||| | | ||||| |||||
Sbjct: 86 agagagagcagatttcacaatcaaggaaatgggtctgcaagatgccattaacaccagaat 145
Query: 300 tggaggttgggga 312
|||||| ||||||
Sbjct: 146 tggaggatgggga 158
>gnl|LJGI|TC57804 similar to UniRef100_A7QT46 Cluster: Chromosome undetermined
scaffold_165, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_165,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 811
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 atgggaccctctggttgtggaaaatctacacttcttgatgct 42
||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 354 atgggtccttctggttgtgggaaatctacacttctcgatgct 395