Miyakogusa Predicted Gene
- Lj4g3v0341090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0341090.1 tr|A2IBG3|A2IBG3_VIGUN Alternative oxidase
OS=Vigna unguiculata GN=Aox2a PE=3 SV=1,79.94,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; coiled-coil,NULL; seg,NULL;
AOX,Alternative oxidase,CUFF.46966.1
(1005 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62302 homologue to UniRef100_A2IBG3 Cluster: Alternat... 1530 0.0
gnl|LJGI|TC58867 homologue to UniRef100_O03376 Cluster: Alternat... 121 9e-27
gnl|LJGI|BW597938 similar to UniRef100_Q39219 Cluster: Alternati... 78 1e-13
gnl|LJGI|TC63850 similar to UniRef100_Q2HCX0 Cluster: Predicted ... 60 3e-08
>gnl|LJGI|TC62302 homologue to UniRef100_A2IBG3 Cluster: Alternative oxidase; n=1;
Vigna unguiculata|Rep: Alternative oxidase - Vigna
unguiculata (Cowpea), partial (77%)
Length = 1267
Score = 1530 bits (772), Expect = 0.0
Identities = 772/772 (100%)
Strand = Plus / Plus
Query: 234 cgacggtagcgtggtggtgtcgagctattgggggatttcgaggccgaagattaccagaga 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cgacggtagcgtggtggtgtcgagctattgggggatttcgaggccgaagattaccagaga 425
Query: 294 ggacggcacagagtggccttggaactgcttcatgccgtgggagacttatcgtccagactt 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggacggcacagagtggccttggaactgcttcatgccgtgggagacttatcgtccagactt 485
Query: 354 gtccatagatctgacgaagcatcatgtgccgaagaattttctggataaagttgcttacag 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtccatagatctgacgaagcatcatgtgccgaagaattttctggataaagttgcttacag 545
Query: 414 gacagtgaagctcctcagaattccaacagatgtgttttttcagagacggtatggttgccg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gacagtgaagctcctcagaattccaacagatgtgttttttcagagacggtatggttgccg 605
Query: 474 agcgatgatgcttgaaacagttgcagctgtacctggaatggtaggagggatgttgctgca 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agcgatgatgcttgaaacagttgcagctgtacctggaatggtaggagggatgttgctgca 665
Query: 534 cttaaggtcactgcgtaagtttcagcagagtggcggatggatcaaggcgttgcttgagga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cttaaggtcactgcgtaagtttcagcagagtggcggatggatcaaggcgttgcttgagga 725
Query: 594 agcagagaatgagagaatgcacctaatgaccatggtggaacttgtgcagcctaaatggta 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 agcagagaatgagagaatgcacctaatgaccatggtggaacttgtgcagcctaaatggta 785
Query: 654 tgaaagatttctggttcttactgtgcagggagttttcttcaatgcgttctttgtgcttta 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tgaaagatttctggttcttactgtgcagggagttttcttcaatgcgttctttgtgcttta 845
Query: 714 tttactctctccaaaggtggctcatagagttgttgggtaccttgaggaggaagctataca 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 tttactctctccaaaggtggctcatagagttgttgggtaccttgaggaggaagctataca 905
Query: 774 ttcttacactgagtatttgaaggacattgagagtggtgcaattgaaaatgttcctgctcc 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 ttcttacactgagtatttgaaggacattgagagtggtgcaattgaaaatgttcctgctcc 965
Query: 834 tgccattgcaatagactattggagacttcccaaggatgctacattgaaagatgttataac 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 tgccattgcaatagactattggagacttcccaaggatgctacattgaaagatgttataac 1025
Query: 894 agtcattcgtgctgatgaggctcaccatcgggacgtgaaccattttgcttctgatatcca 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 agtcattcgtgctgatgaggctcaccatcgggacgtgaaccattttgcttctgatatcca 1085
Query: 954 cttccatggtaaagaactgcgggaggcaccagctcctcttggttatcattag 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 cttccatggtaaagaactgcgggaggcaccagctcctcttggttatcattag 1137
Score = 337 bits (170), Expect = 8e-92
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 1 atgaagcacttggcgttgagttacgcgcttcgccgagcactcaactgtaaccgccacggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atgaagcacttggcgttgagttacgcgcttcgccgagcactcaactgtaaccgccacggg 192
Query: 61 ttgacggcggtgaggcagttaccggcgacggaagtgaggcgttttcttgtaagcggcgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttgacggcggtgaggcagttaccggcgacggaagtgaggcgttttcttgtaagcggcgag 252
Query: 121 aatggagtgttttcgtgctggaacaggatgatgtcttctcaggcggcgcc 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aatggagtgttttcgtgctggaacaggatgatgtcttctcaggcggcgcc 302
>gnl|LJGI|TC58867 homologue to UniRef100_O03376 Cluster: Alternative oxidase 3,
mitochondrial precursor; n=1; Glycine max|Rep:
Alternative oxidase 3, mitochondrial precursor - Glycine
max (Soybean), partial (89%)
Length = 1155
Score = 121 bits (61), Expect = 9e-27
Identities = 157/189 (83%)
Strand = Plus / Plus
Query: 815 ttgaaaatgttcctgctcctgccattgcaatagactattggagacttcccaaggatgcta 874
|||| ||||| |||||||||||||||||||| ||||| ||||| ||||| || ||||| |
Sbjct: 807 ttgagaatgtgcctgctcctgccattgcaattgactactggaggcttcctaaagatgcaa 866
Query: 875 cattgaaagatgttataacagtcattcgtgctgatgaggctcaccatcgggacgtgaacc 934
| | || |||||| | || || |||||||||||||||||||||||| |||| || || |
Sbjct: 867 ctcttaaggatgttgtcactgttattcgtgctgatgaggctcaccatagggatgttaatc 926
Query: 935 attttgcttctgatatccacttccatggtaaagaactgcgggaggcaccagctcctcttg 994
| |||||||||||||| ||| || || |||||| || |||||| ||||||||| |||
Sbjct: 927 actttgcttctgatattcaccatcaagggaaagaattgaaggaggctccagctcctgttg 986
Query: 995 gttatcatt 1003
|||||||||
Sbjct: 987 gttatcatt 995
Score = 105 bits (53), Expect = 5e-22
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 475 gcgatgatgcttgaaacagttgcagctgtacctggaatggtaggagggatgttgctgcac 534
||||||||||| |||||| |||| ||||| || |||||||| ||||||||| ||||||||
Sbjct: 467 gcgatgatgctggaaacaattgcggctgtccccggaatggtgggagggatgctgctgcac 526
Query: 535 ttaaggtcactgcgtaagtttcagcagagtggcggatggatcaaggcgttgcttgaggaa 594
| | |||||| || ||||| || || || || || |||||||| || | |||||||||
Sbjct: 527 ctgaagtcacttcgcaagttccaacacagcggtggctggatcaaagcacttcttgaggaa 586
Query: 595 gcagagaatgagagaatgcacctaatgac 623
|||||||||||||| |||||||| |||||
Sbjct: 587 gcagagaatgagaggatgcacctgatgac 615
>gnl|LJGI|BW597938 similar to UniRef100_Q39219 Cluster: Alternative oxidase 1a,
mitochondrial precursor; n=1; Arabidopsis thaliana|Rep:
Alternative oxidase 1a, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (25%)
Length = 454
Score = 77.8 bits (39), Expect = 1e-13
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 745 gttgggtaccttgaggaggaagctatacattcttacactgagtatttgaaggacattgag 804
||||| ||||||||||| || ||||| || || |||||||||| |||||||| | ||
Sbjct: 14 gttggttaccttgaggaagaggctatccactcctacactgagttcttgaaggagctagac 73
Query: 805 agtggtgcaattgaaaatgttcctgctcctgccattgcaatagactattgg 855
|||||| ||| ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 74 agtggtaaaatagaaaatgttccagctccagccattgccatagactattgg 124
>gnl|LJGI|TC63850 similar to UniRef100_Q2HCX0 Cluster: Predicted protein; n=1;
Chaetomium globosum|Rep: Predicted protein - Chaetomium
globosum (Soil fungus), partial (5%)
Length = 784
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 342 tcgtccagacttgtccatagatctgacgaagcatcatgtgcc 383
|||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 49 tcgttcagacttgtccatagatcttacgaagcaccatgtgcc 8