Miyakogusa Predicted Gene
- Lj4g3v0341080.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0341080.2 Non Chatacterized Hit- tr|C6T3F4|C6T3F4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33499 PE,60.76,2e-18,no
description,NULL; HMA_1,Heavy-metal-associated, conserved site;
HMA,Heavy metal-associated domain,CUFF.46991.2
(651 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76625 similar to UniRef100_A7QII0 Cluster: Chromosome... 521 e-147
gnl|LJGI|TC72314 similar to UniRef100_A9RPF0 Cluster: Predicted ... 224 5e-58
gnl|LJGI|TC59231 weakly similar to UniRef100_A7QII0 Cluster: Chr... 115 4e-25
>gnl|LJGI|TC76625 similar to UniRef100_A7QII0 Cluster: Chromosome chr12 scaffold_103,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 635
Score = 521 bits (263), Expect = e-147
Identities = 263/263 (100%)
Strand = Plus / Plus
Query: 1 atgccaatggattccgctgcgtgctccgtcaccacgacggcgcagatggcactcttcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atgccaatggattccgctgcgtgctccgtcaccacgacggcgcagatggcactcttcaga 140
Query: 61 gcgctccaccgccaattcaccggagcgtctcataaccgcgcgcttctccgccgcaacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gcgctccaccgccaattcaccggagcgtctcataaccgcgcgcttctccgccgcaacctc 200
Query: 121 aaatgcgttgctagttctagcatcaactgcttccgcattccgtgcactttcacttcttcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgcgttgctagttctagcatcaactgcttccgcattccgtgcactttcacttcttcg 260
Query: 181 ccgttgtcgtcgccttctctccgtaccttctgcgcgccgcgctgctgcgtttcgagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgttgtcgtcgccttctctccgtaccttctgcgcgccgcgctgctgcgtttcgagctct 320
Query: 241 gcggcttcgtttgcttcctctgc 263
|||||||||||||||||||||||
Sbjct: 321 gcggcttcgtttgcttcctctgc 343
Score = 438 bits (221), Expect = e-122
Identities = 227/229 (99%)
Strand = Plus / Plus
Query: 327 ggaatccggtgacgctaatctcaaattggttggagctggagacgcagctcaggagctttc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggaatccggtgacgctaatctcaaattggttggagctggagacgcagctcaggagctttc 466
Query: 387 ggctctctcgcctgatgttattatcctcgacgtttcgggaatggtgtgcggaggatgtgc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggctctctcgcctgatgttattatcctcgacgtttcgggaatggtgtgcggaggatgtgc 526
Query: 447 tgcgactgtgaaaaggcttctagagagtcgtccgcaagtgtcatcggccagtgtaaattt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgcgactgtgaaaaggcttctagagagtcgtccgcaagtgtcatcggccagtgtaaattt 586
Query: 507 aacaacagagacagcaatagtttggcctgtatctgaagcaaagactgca 555
|| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aaacacagagacagcaatagtttggcctgtatctgaagcaaagactgca 635
>gnl|LJGI|TC72314 similar to UniRef100_A9RPF0 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(7%)
Length = 572
Score = 224 bits (113), Expect = 5e-58
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 539 ctgaagcaaagactgcaccaaattggcaacatcaattaggggagacacttgcagagcatt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaagcaaagactgcaccaaattggcaacatcaattaggggagacacttgcagagcatt 60
Query: 599 taactagctgtggtttcaattctagcattcgaggtgacgaagctaacacgtga 651
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taactagctgtggtttcaattctagcattcgaggtgacgaagctaacacgtga 113
>gnl|LJGI|TC59231 weakly similar to UniRef100_A7QII0 Cluster: Chromosome chr12
scaffold_103, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_103, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 761
Score = 115 bits (58), Expect = 4e-25
Identities = 136/162 (83%)
Strand = Plus / Plus
Query: 472 agtcgtccgcaagtgtcatcggccagtgtaaatttaacaacagagacagcaatagtttgg 531
||||| || ||||||||||| || ||||||||| || || | |||| |||||||||||
Sbjct: 344 agtcgaccacaagtgtcatctgctagtgtaaatctagcatctgagatagcaatagtttac 403
Query: 532 cctgtatctgaagcaaagactgcaccaaattggcaacatcaattaggggagacacttgca 591
|||| ||| |||| ||| || |||||| |||||||| | |||||||| ||| |||||||
Sbjct: 404 cctgcatccgaagaaaaaacggcaccagattggcaaaagcaattaggagaggcacttgcg 463
Query: 592 gagcatttaactagctgtggtttcaattctagcattcgaggt 633
||||||||||||| ||||||||||| ||||||| ||| ||||
Sbjct: 464 gagcatttaactaactgtggtttcagttctagccttcaaggt 505