Miyakogusa Predicted Gene

Lj4g3v0340950.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0340950.1 Non Chatacterized Hit- tr|I1H4X7|I1H4X7_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,46.72,8e-18,
,CUFF.47008.1
         (1659 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS321071 weakly similar to UniRef100_Q6BC34 Cluster: Sc...   906   0.0  
gnl|LJGI|DC596703                                                     484   e-136
gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosom...   456   e-127
gnl|LJGI|AV772796                                                     232   6e-60
gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosom...    88   2e-16
gnl|LJGI|TC82570 weakly similar to UniRef100_A7QGP3 Cluster: Chr...    78   2e-13
gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromoso...    76   8e-13

>gnl|LJGI|FS321071 weakly similar to UniRef100_Q6BC34 Cluster: Scallop shell matrix
           protein; n=1; Mizuhopecten yessoensis|Rep: Scallop shell
           matrix protein - Patinopecten yessoensis (Ezo giant
           scallop) (Yesso scallop), partial (5%)
          Length = 752

 Score =  906 bits (457), Expect = 0.0
 Identities = 460/461 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 351

                                                                       
Query: 61  gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 411

                                                                       
Query: 121 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 471

                                                                       
Query: 181 ggagacaagtgtttgatggaggatgatactgtgtctcaatattcaatcagtcacatatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggagacaagtgtttgatggaggatgatactgtgtctcaatattcaatcagtcacatatct 531

                                                                       
Query: 241 caacctgataatgaacttagcttccttgataatgatgggtggcttgattttggaaacttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 caacctgataatgaacttagcttccttgataatgatgggtggcttgattttggaaacttt 591

                                                                       
Query: 301 gaacatattgataggacgatgctaaattgtgacttaacttttggaatggggagcctcaat 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaagatattgataggacgatgctaaattgtgacttaacttttggaatggggagcctcaat 651

                                                                       
Query: 361 aatgaagaggagttctgctggctctcatcttcacatggaactgagggatctgatgatgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aatgaagaggagttctgctggctctcatcttcacatggaactgagggatctgatgatgca 711

                                                    
Query: 421 ctgaaatctgacttcaagttttcatctgctgaagcaagtcc 461
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ctgaaatctgacttcaagttttcatctgctgaagcaagtcc 752


>gnl|LJGI|DC596703 
          Length = 567

 Score =  484 bits (244), Expect = e-136
 Identities = 246/247 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 380

                                                                       
Query: 61  gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 440

                                                                       
Query: 121 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 500

                                                                       
Query: 181 ggagacaagtgtttgatggaggatgatactgtgtctcaatattcaatcagtcacatatct 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ggagacaagtgtttgatggaggatgatactgtgtctcnatattcaatcagtcacatatct 560

                  
Query: 241 caacctg 247
           |||||||
Sbjct: 561 caacctg 567


>gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_93, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (32%)
          Length = 727

 Score =  456 bits (230), Expect = e-127
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1409 accgtttggctaaaagtgctgaacaaagacataatgattccaatgcaagtggtcaaatgg 1468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727  accgtttggctaaaagtgctgaacaaagacataatgattccaatgcaagtggtcaaatgg 668

                                                                        
Query: 1469 gtgatgatgttgatatggcacaagatgcaaacaggtatactggattcgcgaacatggaaa 1528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667  gtgatgatgttgatatggcacaagatgcaaacaggtatactggattcgcgaacatggaaa 608

                                                                        
Query: 1529 ctgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctcagatt 1588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607  ctgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctcagatt 548

                                                              
Query: 1589 catcaatgttgcccattaatgatcctttatcgttcaaatctagttcgacg 1638
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547  catcaatgttgcccattaatgatcctttatcgttcaaatctagttcgacg 498


>gnl|LJGI|AV772796 
          Length = 418

 Score =  232 bits (117), Expect = 6e-60
 Identities = 159/169 (94%), Gaps = 3/169 (1%)
 Strand = Plus / Minus

                                                                       
Query: 503 atattgaaggtctgacaattcatgattgcagcagaaaggcatctcctattaataaaaatc 562
           |||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||||||
Sbjct: 418 atattgaaggtctgaccattcctgattgcagccgaaaggcatctcctatttataaaaatc 359

                                                                       
Query: 563 tgaagtctcagatgaatgtcgaccatga-tgctgttcctgcttcgttatcaatgttcagt 621
           |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 358 tgaagtctcagatgaatgtcgaccctgactgctgttcctgcttcgttatccatgttcagt 299

                                                            
Query: 622 gaatcagaca-tgacg-ttcggtgttgaagatggcttggtgcataaacc 668
           |||||||||| ||||| | ||||||||||||||||||||||||||||||
Sbjct: 298 gaatcagacactgacgctccggtgttgaagatggcttggtgcataaacc 250


>gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_93, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (47%)
          Length = 890

 Score = 87.7 bits (44), Expect = 2e-16
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1361 tggatcagttggacatcaaaaccaaactatgtataagggacagtctataccgtttggcta 1420
            ||||||||||||| || | ||||||||| || |||||||||||||||||||| |||||||
Sbjct: 617  tggatcagttggatattagaaccaaactgtgcataagggacagtctataccgcttggcta 558

                                
Query: 1421 aaagtgctgaacaaagacat 1440
            | ||||| || |||||||||
Sbjct: 557  agagtgcggagcaaagacat 538



 Score = 56.0 bits (28), Expect = 7e-07
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                        
Query: 1525 gaaactgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctca 1584
            |||| ||| |||||||| |||||||||||||| ||||| ||||| || ||||| || |||
Sbjct: 438  gaaattgacacaaatcctattgatcggtctatagcacatttgctatttcacaggccttca 379

                            
Query: 1585 gattcatcaatgttgc 1600
            ||  |||||| |||||
Sbjct: 378  gagccatcaacgttgc 363


>gnl|LJGI|TC82570 weakly similar to UniRef100_A7QGP3 Cluster: Chromosome chr12
           scaffold_93, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_93, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (25%)
          Length = 720

 Score = 77.8 bits (39), Expect = 2e-13
 Identities = 120/147 (81%)
 Strand = Plus / Plus

                                                                       
Query: 160 tgtgcggatgatactatcttaggagacaagtgtttgatggaggatgatactgtgtctcaa 219
           ||||| |||||||  ||||| | |||||||||| || |||| ||||||| || || ||||
Sbjct: 574 tgtgcagatgatatcatcttggaagacaagtgtgtggtggaagatgataatgagtgtcaa 633

                                                                       
Query: 220 tattcaatcagtcacatatctcaacctgataatgaacttagcttccttgataatgatggg 279
           ||| |||||  ||| | ||| ||| |||| |||||||| || || |||||||||||||||
Sbjct: 634 tatccaatccatcatacatcccaagctgacaatgaactcagttttcttgataatgatggg 693

                                      
Query: 280 tggcttgattttggaaactttgaacat 306
           ||||| ||| | ||| |||| ||||||
Sbjct: 694 tggctggatatcggacacttcgaacat 720


>gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_93, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (36%)
          Length = 718

 Score = 75.8 bits (38), Expect = 8e-13
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1367 agttggacatcaaaaccaaactatgtataagggacagtctataccgtttggctaaaagtg 1426
            ||||||| || | ||||||||| || |||||||||||||||||||| |||||||| ||||
Sbjct: 65   agttggatattagaaccaaactgtgcataagggacagtctataccgcttggctaagagtg 124

                          
Query: 1427 ctgaacaaagacat 1440
            | || |||||||||
Sbjct: 125  cggagcaaagacat 138



 Score = 56.0 bits (28), Expect = 7e-07
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1525 gaaactgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctca 1584
            |||| ||| |||||||| |||||||||||||| ||||| ||||| || ||||| || |||
Sbjct: 238  gaaattgacacaaatcctattgatcggtctatagcacatttgctatttcacaggccttca 297

                            
Query: 1585 gattcatcaatgttgc 1600
            ||  |||||| |||||
Sbjct: 298  gagccatcaacgttgc 313