Miyakogusa Predicted Gene
- Lj4g3v0340950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0340950.1 Non Chatacterized Hit- tr|I1H4X7|I1H4X7_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,46.72,8e-18,
,CUFF.47008.1
(1659 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS321071 weakly similar to UniRef100_Q6BC34 Cluster: Sc... 906 0.0
gnl|LJGI|DC596703 484 e-136
gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosom... 456 e-127
gnl|LJGI|AV772796 232 6e-60
gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosom... 88 2e-16
gnl|LJGI|TC82570 weakly similar to UniRef100_A7QGP3 Cluster: Chr... 78 2e-13
gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromoso... 76 8e-13
>gnl|LJGI|FS321071 weakly similar to UniRef100_Q6BC34 Cluster: Scallop shell matrix
protein; n=1; Mizuhopecten yessoensis|Rep: Scallop shell
matrix protein - Patinopecten yessoensis (Ezo giant
scallop) (Yesso scallop), partial (5%)
Length = 752
Score = 906 bits (457), Expect = 0.0
Identities = 460/461 (99%)
Strand = Plus / Plus
Query: 1 atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 351
Query: 61 gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 411
Query: 121 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 471
Query: 181 ggagacaagtgtttgatggaggatgatactgtgtctcaatattcaatcagtcacatatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggagacaagtgtttgatggaggatgatactgtgtctcaatattcaatcagtcacatatct 531
Query: 241 caacctgataatgaacttagcttccttgataatgatgggtggcttgattttggaaacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 caacctgataatgaacttagcttccttgataatgatgggtggcttgattttggaaacttt 591
Query: 301 gaacatattgataggacgatgctaaattgtgacttaacttttggaatggggagcctcaat 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaagatattgataggacgatgctaaattgtgacttaacttttggaatggggagcctcaat 651
Query: 361 aatgaagaggagttctgctggctctcatcttcacatggaactgagggatctgatgatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aatgaagaggagttctgctggctctcatcttcacatggaactgagggatctgatgatgca 711
Query: 421 ctgaaatctgacttcaagttttcatctgctgaagcaagtcc 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ctgaaatctgacttcaagttttcatctgctgaagcaagtcc 752
>gnl|LJGI|DC596703
Length = 567
Score = 484 bits (244), Expect = e-136
Identities = 246/247 (99%)
Strand = Plus / Plus
Query: 1 atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtcggagaaaggttcatggtctcacaaacctgaagatctgctttctccatgtgttggt 380
Query: 61 gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattcatgcaaagaacagaaaagggaaacatcagataatagaagtatgtctgatcattat 440
Query: 121 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaagagcagcaatttagattctactggtggtgaactttgtgcggatgatactatctta 500
Query: 181 ggagacaagtgtttgatggaggatgatactgtgtctcaatattcaatcagtcacatatct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ggagacaagtgtttgatggaggatgatactgtgtctcnatattcaatcagtcacatatct 560
Query: 241 caacctg 247
|||||||
Sbjct: 561 caacctg 567
>gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 727
Score = 456 bits (230), Expect = e-127
Identities = 230/230 (100%)
Strand = Plus / Minus
Query: 1409 accgtttggctaaaagtgctgaacaaagacataatgattccaatgcaagtggtcaaatgg 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 accgtttggctaaaagtgctgaacaaagacataatgattccaatgcaagtggtcaaatgg 668
Query: 1469 gtgatgatgttgatatggcacaagatgcaaacaggtatactggattcgcgaacatggaaa 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gtgatgatgttgatatggcacaagatgcaaacaggtatactggattcgcgaacatggaaa 608
Query: 1529 ctgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctcagatt 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ctgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctcagatt 548
Query: 1589 catcaatgttgcccattaatgatcctttatcgttcaaatctagttcgacg 1638
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 catcaatgttgcccattaatgatcctttatcgttcaaatctagttcgacg 498
>gnl|LJGI|AV772796
Length = 418
Score = 232 bits (117), Expect = 6e-60
Identities = 159/169 (94%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 503 atattgaaggtctgacaattcatgattgcagcagaaaggcatctcctattaataaaaatc 562
|||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||||||
Sbjct: 418 atattgaaggtctgaccattcctgattgcagccgaaaggcatctcctatttataaaaatc 359
Query: 563 tgaagtctcagatgaatgtcgaccatga-tgctgttcctgcttcgttatcaatgttcagt 621
|||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 358 tgaagtctcagatgaatgtcgaccctgactgctgttcctgcttcgttatccatgttcagt 299
Query: 622 gaatcagaca-tgacg-ttcggtgttgaagatggcttggtgcataaacc 668
|||||||||| ||||| | ||||||||||||||||||||||||||||||
Sbjct: 298 gaatcagacactgacgctccggtgttgaagatggcttggtgcataaacc 250
>gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 890
Score = 87.7 bits (44), Expect = 2e-16
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 1361 tggatcagttggacatcaaaaccaaactatgtataagggacagtctataccgtttggcta 1420
||||||||||||| || | ||||||||| || |||||||||||||||||||| |||||||
Sbjct: 617 tggatcagttggatattagaaccaaactgtgcataagggacagtctataccgcttggcta 558
Query: 1421 aaagtgctgaacaaagacat 1440
| ||||| || |||||||||
Sbjct: 557 agagtgcggagcaaagacat 538
Score = 56.0 bits (28), Expect = 7e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 1525 gaaactgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctca 1584
|||| ||| |||||||| |||||||||||||| ||||| ||||| || ||||| || |||
Sbjct: 438 gaaattgacacaaatcctattgatcggtctatagcacatttgctatttcacaggccttca 379
Query: 1585 gattcatcaatgttgc 1600
|| |||||| |||||
Sbjct: 378 gagccatcaacgttgc 363
>gnl|LJGI|TC82570 weakly similar to UniRef100_A7QGP3 Cluster: Chromosome chr12
scaffold_93, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_93, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 720
Score = 77.8 bits (39), Expect = 2e-13
Identities = 120/147 (81%)
Strand = Plus / Plus
Query: 160 tgtgcggatgatactatcttaggagacaagtgtttgatggaggatgatactgtgtctcaa 219
||||| ||||||| ||||| | |||||||||| || |||| ||||||| || || ||||
Sbjct: 574 tgtgcagatgatatcatcttggaagacaagtgtgtggtggaagatgataatgagtgtcaa 633
Query: 220 tattcaatcagtcacatatctcaacctgataatgaacttagcttccttgataatgatggg 279
||| ||||| ||| | ||| ||| |||| |||||||| || || |||||||||||||||
Sbjct: 634 tatccaatccatcatacatcccaagctgacaatgaactcagttttcttgataatgatggg 693
Query: 280 tggcttgattttggaaactttgaacat 306
||||| ||| | ||| |||| ||||||
Sbjct: 694 tggctggatatcggacacttcgaacat 720
>gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 718
Score = 75.8 bits (38), Expect = 8e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 1367 agttggacatcaaaaccaaactatgtataagggacagtctataccgtttggctaaaagtg 1426
||||||| || | ||||||||| || |||||||||||||||||||| |||||||| ||||
Sbjct: 65 agttggatattagaaccaaactgtgcataagggacagtctataccgcttggctaagagtg 124
Query: 1427 ctgaacaaagacat 1440
| || |||||||||
Sbjct: 125 cggagcaaagacat 138
Score = 56.0 bits (28), Expect = 7e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1525 gaaactgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctca 1584
|||| ||| |||||||| |||||||||||||| ||||| ||||| || ||||| || |||
Sbjct: 238 gaaattgacacaaatcctattgatcggtctatagcacatttgctatttcacaggccttca 297
Query: 1585 gattcatcaatgttgc 1600
|| |||||| |||||
Sbjct: 298 gagccatcaacgttgc 313