Miyakogusa Predicted Gene
- Lj4g3v0340800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0340800.1 Non Chatacterized Hit- tr|K4BNG5|K4BNG5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,46.56,4e-19,Ribosomal_L32p,Ribosomal protein L32p; Zn-binding
ribosomal proteins,Ribosomal protein, zinc-binding,CUFF.46998.1
(381 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS319632 similar to UniRef100_Q944L5 Cluster: At1g26740... 755 0.0
gnl|LJGI|TC58561 similar to UniRef100_Q944L5 Cluster: At1g26740/... 755 0.0
gnl|LJGI|GO025513 264 4e-70
gnl|LJGI|TC80066 homologue to UniRef100_Q96RE5 Cluster: Glioblas... 50 1e-05
>gnl|LJGI|FS319632 similar to UniRef100_Q944L5 Cluster: At1g26740/T24P13_11; n=1;
Arabidopsis thaliana|Rep: At1g26740/T24P13_11 -
Arabidopsis thaliana (Mouse-ear cress), partial (43%)
Length = 818
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1 atgggcataaccgcaggaatggcaaccaaattcgcgattctcaggggcaatgggaggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atgggcataaccgcaggaatggcaaccaaattcgcgattctcaggggcaatgggaggagc 372
Query: 61 cttttagggttcaataggttgtttcattcggtgcctcctttagctggaagcattgacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cttttagggttcaataggttgtttcattcggtgcctcctttagctggaagcattgacatt 432
Query: 121 ggagttccctcatcgcaaccggttttgcctgagtttacttccccgagtttctcttttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggagttccctcatcgcaaccggttttgcctgagtttacttccccgagtttctcttttggt 492
Query: 181 gattctatggagctcatggctgtccccaaaaggaagatttctaagtctagaagaggaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gattctatggagctcatggctgtccccaaaaggaagatttctaagtctagaagaggaata 552
Query: 241 agaaatggaccaaaagctttgaaacctattcctgtgcttgtcctgtgcaagggttgtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agaaatggaccaaaagctttgaaacctattcctgtgcttgtcctgtgcaagggttgtggt 612
Query: 301 cgtgtccggcttccacactactactgctgtagtgggaaaccaaaccacgatcatactggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgtgtccggcttccacactactactgctgtagtgggaaaccaaaccacgatcatactggt 672
Query: 361 gagcagaatggtcgaaactga 381
|||||||||||||||||||||
Sbjct: 673 gagcagaatggtcgaaactga 693
>gnl|LJGI|TC58561 similar to UniRef100_Q944L5 Cluster: At1g26740/T24P13_11; n=1;
Arabidopsis thaliana|Rep: At1g26740/T24P13_11 -
Arabidopsis thaliana (Mouse-ear cress), partial (43%)
Length = 892
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1 atgggcataaccgcaggaatggcaaccaaattcgcgattctcaggggcaatgggaggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atgggcataaccgcaggaatggcaaccaaattcgcgattctcaggggcaatgggaggagc 289
Query: 61 cttttagggttcaataggttgtttcattcggtgcctcctttagctggaagcattgacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cttttagggttcaataggttgtttcattcggtgcctcctttagctggaagcattgacatt 349
Query: 121 ggagttccctcatcgcaaccggttttgcctgagtttacttccccgagtttctcttttggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggagttccctcatcgcaaccggttttgcctgagtttacttccccgagtttctcttttggt 409
Query: 181 gattctatggagctcatggctgtccccaaaaggaagatttctaagtctagaagaggaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gattctatggagctcatggctgtccccaaaaggaagatttctaagtctagaagaggaata 469
Query: 241 agaaatggaccaaaagctttgaaacctattcctgtgcttgtcctgtgcaagggttgtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agaaatggaccaaaagctttgaaacctattcctgtgcttgtcctgtgcaagggttgtggt 529
Query: 301 cgtgtccggcttccacactactactgctgtagtgggaaaccaaaccacgatcatactggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cgtgtccggcttccacactactactgctgtagtgggaaaccaaaccacgatcatactggt 589
Query: 361 gagcagaatggtcgaaactga 381
|||||||||||||||||||||
Sbjct: 590 gagcagaatggtcgaaactga 610
>gnl|LJGI|GO025513
Length = 412
Score = 264 bits (133), Expect = 4e-70
Identities = 136/137 (99%)
Strand = Plus / Plus
Query: 1 atgggcataaccgcaggaatggcaaccaaattcgcgattctcaggggcaatgggaggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgggcataaccgcaggaatggcaaccaaattcgcgattctcaggggcaatgggaggagc 335
Query: 61 cttttagggttcaataggttgtttcattcggtgcctcctttagctggaagcattgacatt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 336 cttttagggttcaataggttgtttcattcggtacctcctttagctggaagcattgacatt 395
Query: 121 ggagttccctcatcgca 137
|||||||||||||||||
Sbjct: 396 ggagttccctcatcgca 412
>gnl|LJGI|TC80066 homologue to UniRef100_Q96RE5 Cluster: Glioblastoma amplified
secreted protein; n=1; Homo sapiens|Rep: Glioblastoma
amplified secreted protein - Homo sapiens (Human),
partial (9%)
Length = 355
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 atgggcataaccgcaggaatggcaa 25
|||||||||||||||||||||||||
Sbjct: 331 atgggcataaccgcaggaatggcaa 355