Miyakogusa Predicted Gene
- Lj4g3v0340780.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0340780.1 Non Chatacterized Hit- tr|K4BP61|K4BP61_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,32.58,8e-17,
,CUFF.46996.1
(1506 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS321071 weakly similar to UniRef100_Q6BC34 Cluster: Sc... 698 0.0
gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosom... 353 2e-96
gnl|LJGI|DC596703 268 9e-71
gnl|LJGI|AV772796 232 5e-60
gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosom... 88 2e-16
gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromoso... 76 7e-13
gnl|LJGI|TC82570 weakly similar to UniRef100_A7QGP3 Cluster: Chr... 72 1e-11
>gnl|LJGI|FS321071 weakly similar to UniRef100_Q6BC34 Cluster: Scallop shell matrix
protein; n=1; Mizuhopecten yessoensis|Rep: Scallop shell
matrix protein - Patinopecten yessoensis (Ezo giant
scallop) (Yesso scallop), partial (5%)
Length = 752
Score = 698 bits (352), Expect = 0.0
Identities = 355/356 (99%)
Strand = Plus / Plus
Query: 1 atgtctgatcattatttcaagagcagcaatttagattctactggtggtgaacttggtgcg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 397 atgtctgatcattatttcaagagcagcaatttagattctactggtggtgaactttgtgcg 456
Query: 61 gatgatactatcttaggagacaagtgtttgatggaggatgatactgtgtctcaatattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gatgatactatcttaggagacaagtgtttgatggaggatgatactgtgtctcaatattca 516
Query: 121 atcagtcacatatctcaacctgataatgaacttagcttccttgataatgatgggtggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atcagtcacatatctcaacctgataatgaacttagcttccttgataatgatgggtggctt 576
Query: 181 gattttggaaactttgaagatattgataggacgatgctaaattgtgacttaacttttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gattttggaaactttgaagatattgataggacgatgctaaattgtgacttaacttttgga 636
Query: 241 atggggagcctcaataatgaagaggagttctgctggctctcatcttcacatggaactgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 atggggagcctcaataatgaagaggagttctgctggctctcatcttcacatggaactgag 696
Query: 301 ggatctgatgatgcactgaaatctgacttcaagttttcatctgctgaagcaagtcc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ggatctgatgatgcactgaaatctgacttcaagttttcatctgctgaagcaagtcc 752
>gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 727
Score = 353 bits (178), Expect = 2e-96
Identities = 197/203 (97%), Gaps = 4/203 (1%)
Strand = Plus / Minus
Query: 1304 accgtttggctaaaagtgctgaacaaagacataatgataccaatgcaagtggtcaaatgg 1363
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 727 accgtttggctaaaagtgctgaacaaagacataatgattccaatgcaagtggtcaaatgg 668
Query: 1364 gtgatgatgttgatatggcacaagatgcaaacaggtatactggattcgcgaacatggaaa 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gtgatgatgttgatatggcacaagatgcaaacaggtatactggattcgcgaacatggaaa 608
Query: 1424 ctaatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctcagtca 1483
|| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 607 ctgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccc----tca 552
Query: 1484 gattcatcaatgttgcccattaa 1506
|||||||||||||||||||||||
Sbjct: 551 gattcatcaatgttgcccattaa 529
>gnl|LJGI|DC596703
Length = 567
Score = 268 bits (135), Expect = 9e-71
Identities = 140/142 (98%)
Strand = Plus / Plus
Query: 1 atgtctgatcattatttcaagagcagcaatttagattctactggtggtgaacttggtgcg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 426 atgtctgatcattatttcaagagcagcaatttagattctactggtggtgaactttgtgcg 485
Query: 61 gatgatactatcttaggagacaagtgtttgatggaggatgatactgtgtctcaatattca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 486 gatgatactatcttaggagacaagtgtttgatggaggatgatactgtgtctcnatattca 545
Query: 121 atcagtcacatatctcaacctg 142
||||||||||||||||||||||
Sbjct: 546 atcagtcacatatctcaacctg 567
>gnl|LJGI|AV772796
Length = 418
Score = 232 bits (117), Expect = 5e-60
Identities = 159/169 (94%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 398 atattgaaggtctgacaattcatgattgcagcagaaaggcatctcctattaataaaaatc 457
|||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||||||
Sbjct: 418 atattgaaggtctgaccattcctgattgcagccgaaaggcatctcctatttataaaaatc 359
Query: 458 tgaagtctcagatgaatgtcgaccatga-tgctgttcctgcttcgttatcaatgttcagt 516
|||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||
Sbjct: 358 tgaagtctcagatgaatgtcgaccctgactgctgttcctgcttcgttatccatgttcagt 299
Query: 517 gaatcagaca-tgatg-tccggtgttgaagatggcttggtgcataaacc 563
|||||||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 298 gaatcagacactgacgctccggtgttgaagatggcttggtgcataaacc 250
>gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 890
Score = 87.7 bits (44), Expect = 2e-16
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 1256 tggatcagttggacatcaaaaccaaactatgtataagggacagtctataccgtttggcta 1315
||||||||||||| || | ||||||||| || |||||||||||||||||||| |||||||
Sbjct: 617 tggatcagttggatattagaaccaaactgtgcataagggacagtctataccgcttggcta 558
Query: 1316 aaagtgctgaacaaagacat 1335
| ||||| || |||||||||
Sbjct: 557 agagtgcggagcaaagacat 538
>gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 718
Score = 75.8 bits (38), Expect = 7e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 1262 agttggacatcaaaaccaaactatgtataagggacagtctataccgtttggctaaaagtg 1321
||||||| || | ||||||||| || |||||||||||||||||||| |||||||| ||||
Sbjct: 65 agttggatattagaaccaaactgtgcataagggacagtctataccgcttggctaagagtg 124
Query: 1322 ctgaacaaagacat 1335
| || |||||||||
Sbjct: 125 cggagcaaagacat 138
>gnl|LJGI|TC82570 weakly similar to UniRef100_A7QGP3 Cluster: Chromosome chr12
scaffold_93, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_93, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 720
Score = 71.9 bits (36), Expect = 1e-11
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 56 gtgcggatgatactatcttaggagacaagtgtttgatggaggatgatactgtgtctcaat 115
|||| ||||||| ||||| | |||||||||| || |||| ||||||| || || |||||
Sbjct: 575 gtgcagatgatatcatcttggaagacaagtgtgtggtggaagatgataatgagtgtcaat 634
Query: 116 attcaatcagtcacatatctcaacctgataatgaacttagcttccttgataatgatgggt 175
|| ||||| ||| | ||| ||| |||| |||||||| || || ||||||||||||||||
Sbjct: 635 atccaatccatcatacatcccaagctgacaatgaactcagttttcttgataatgatgggt 694
Query: 176 ggct 179
||||
Sbjct: 695 ggct 698