Miyakogusa Predicted Gene
- Lj4g3v0340770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0340770.1 Non Chatacterized Hit- tr|B9SWA2|B9SWA2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,43.65,0.0000000000008,seg,NULL,CUFF.46995.1
(726 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73750 similar to UniRef100_A7QGP5 Cluster: Chromosome... 1398 0.0
gnl|LJGI|GO024390 similar to UniRef100_A7QGP5 Cluster: Chromosom... 1092 0.0
gnl|LJGI|BW604949 similar to UniRef100_A7QGP5 Cluster: Chromosom... 708 0.0
gnl|LJGI|GO024854 similar to UniRef100_A7QGM1 Cluster: Chromosom... 226 2e-58
>gnl|LJGI|TC73750 similar to UniRef100_A7QGP5 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 1013
Score = 1398 bits (705), Expect = 0.0
Identities = 719/726 (99%)
Strand = Plus / Plus
Query: 1 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 144
Query: 61 atctccaactccgacgaagaccacgacggcgacggtgaaccctccacggcggcccacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atctccaactccgacgaagaccacgacggcgacggtgaaccctccacggcggcccacccc 204
Query: 121 tctcttgctgacagatccatcttcgaccaccttnnnnnnnaatcttcttctgctcttcct 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 tctcttgctgacagatccatcttcgaccaccttcccccccaatcttcttctgctcttcct 264
Query: 181 tccgcattcgacgcattctccgaagtttcaggtccaccccagttcctgaacaatagcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccgcattcgacgcattctccgaagtttcaggtccaccccagttcctgaacaatagcgtg 324
Query: 241 gaggagtataatccagtaagagaagaagctgaacaggaacaagagaggcgtggcagtagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaggagtataatccagtaagagaagaagctgaacaggaacaagagaggcgtggcagtagg 384
Query: 301 aggcaacgcaaggtgaagaaggatttaccttcaggtgcggtgttagaggcaaaacctcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggcaacgcaaggtgaagaaggatttaccttcaggtgcggtgttagaggcaaaacctcaa 444
Query: 361 ctagttgggattcatgagcgagtaagaagtgatatcaatggtagccaaccaccaacatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctagttgggattcatgagcgagtaagaagtgatatcaatggtagccaaccaccaacatca 504
Query: 421 actaccttgagcacctcagaagaaaccaagcgggtgccatctgtgaccaatcctactcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actaccttgagcacctcagaagaaaccaagcgggtgccatctgtgaccaatcctactcct 564
Query: 481 gaagatgctgcagatcttttgagaatgtgcttgcagtgtgggattcctaagaccttctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaagatgctgcagatcttttgagaatgtgcttgcagtgtgggattcctaagaccttctcc 624
Query: 541 aatgcacgtgggatggtatgtcctgtgtgtggtgatcgccctccaaaggatcctagcaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatgcacgtgggatggtatgtcctgtgtgtggtgatcgccctccaaaggatcctagcaca 684
Query: 601 gagactaagaataaaggatcaactatcaaagacaaggaaaaatctaaaaggatgaaggga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagactaagaataaaggatcaactatcaaagacaaggaaaaatctaaaaggatgaaggga 744
Query: 661 caatcatctcatgcaagctggaagagtgaaacagagatgcaccttaggcaacagtttgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caatcatctcatgcaagctggaagagtgaaacagagatgcaccttaggcaacagtttgat 804
Query: 721 tagcat 726
||||||
Sbjct: 805 tagcat 810
>gnl|LJGI|GO024390 similar to UniRef100_A7QGP5 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 641
Score = 1092 bits (551), Expect = 0.0
Identities = 593/610 (97%), Gaps = 7/610 (1%)
Strand = Plus / Plus
Query: 1 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 98
Query: 61 atctccaactccgacgaagaccacgacggcgacggtgaaccctccacggcggcccacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atctccaactccgacgaagaccacgacggcgacggtgaaccctccacggcggcccacccc 158
Query: 121 tctcttgctgacagatccatcttcgaccaccttnnnnnnnaatcttcttctgctcttcct 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 159 cctcttgctgacagatccatcttcgaccaccttcccccccaatcttcttctgctcttcct 218
Query: 181 tccgcattcgacgcattctccgaagtttcaggtccaccccagttcctgaacaatagcgtg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 219 tccgcattcgacgcattctccgaagt-------ccaccccagttcctgaacaatagcgtg 271
Query: 241 gaggagtataatccagtaagagaagaagctgaacaggaacaagagaggcgtggcagtagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaggagtataatccagtaagagaagaagctgaacaggaacaagagaggcgtggcagtagg 331
Query: 301 aggcaacgcaaggtgaagaaggatttaccttcaggtgcggtgttagaggcaaaacctcaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 332 aggcaacgcaaggtgaagaaggatttaccttcaggtgcggtgttagaggcaaaacctcga 391
Query: 361 ctagttgggattcatgagcgagtaagaagtgatatcaatggtagccaaccaccaacatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctagttgggattcatgagcgagtaagaagtgatatcaatggtagccaaccaccaacatca 451
Query: 421 actaccttgagcacctcagaagaaaccaagcgggtgccatctgtgaccaatcctactcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 actaccttgagcacctcagaagaaaccaagcgggtgccatctgtgaccaatcctactcct 511
Query: 481 gaagatgctgcagatcttttgagaatgtgcttgcagtgtgggattcctaagaccttctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaagatgctgcagatcttttgagaatgtgcttgcagtgtgggattcctaagaccttctcc 571
Query: 541 aatgcacgtgggatggtatgtcctgtgtgtggtgatcgccctccaaaggatcctagcaca 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aatgcacgtgggatggtgtgtcctgtgtgtggtgatcgccctccaaaggatcctagcaca 631
Query: 601 gagactaaga 610
||||||||||
Sbjct: 632 gagactaaga 641
>gnl|LJGI|BW604949 similar to UniRef100_A7QGP5 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 490
Score = 708 bits (357), Expect = 0.0
Identities = 371/378 (98%)
Strand = Plus / Plus
Query: 1 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 172
Query: 61 atctccaactccgacgaagaccacgacggcgacggtgaaccctccacggcggcccacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atctccaactccgacgaagaccacgacggcgacggtgaaccctccacggcggcccacccc 232
Query: 121 tctcttgctgacagatccatcttcgaccaccttnnnnnnnaatcttcttctgctcttcct 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 233 tctcttgctgacagatccatcttcgaccaccttcccccccaatcttcttctgctcttcct 292
Query: 181 tccgcattcgacgcattctccgaagtttcaggtccaccccagttcctgaacaatagcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tccgcattcgacgcattctccgaagtttcaggtccaccccagttcctgaacaatagcgtg 352
Query: 241 gaggagtataatccagtaagagaagaagctgaacaggaacaagagaggcgtggcagtagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaggagtataatccagtaagagaagaagctgaacaggaacaagagaggcgtggcagtagg 412
Query: 301 aggcaacgcaaggtgaagaaggatttaccttcaggtgcggtgttagaggcaaaacctcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aggcaacgcaaggtgaagaaggatttaccttcaggtgcggtgttagaggcaaaacctcaa 472
Query: 361 ctagttgggattcatgag 378
||||||||||||||||||
Sbjct: 473 ctagttgggattcatgag 490
>gnl|LJGI|GO024854 similar to UniRef100_A7QGM1 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 571
Score = 226 bits (114), Expect = 2e-58
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 613 aaaggatcaactatcaaagacaaggaaaaatctaaaaggatgaagggacaatcatctcat 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaaggatcaactatcaaagacaaggaaaaatctaaaaggatgaagggacaatcatctcat 244
Query: 673 gcaagctggaagagtgaaacagagatgcaccttaggcaacagtttgattagcat 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcaagctggaagagtgaaacagagatgcaccttaggcaacagtttgattagcat 298
Score = 210 bits (106), Expect = 9e-54
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 1 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atgagtttgtctcttcttcaaagctattcttccgacgaagacgaacaccaccaaccctac 139
Query: 61 atctccaactccgacgaagaccacgacggcgacggtgaaccctcca 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atctccaactccgacgaagaccacgacggcgacggtgaaccctcca 185