Miyakogusa Predicted Gene

Lj4g3v0340710.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0340710.1 Non Chatacterized Hit- tr|J3LSA8|J3LSA8_ORYBR
Uncharacterized protein (Fragment) OS=Oryza
brachyanth,50.75,0.000000000008,seg,NULL; Hyccin,Hyccin,CUFF.46958.1
         (1234 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58933 similar to UniRef100_A7Q6Z6 Cluster: Chromosome...  1665   0.0  

>gnl|LJGI|TC58933 similar to UniRef100_A7Q6Z6 Cluster: Chromosome chr12 scaffold_57,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr12 scaffold_57, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (64%)
          Length = 1604

 Score = 1665 bits (840), Expect = 0.0
 Identities = 840/840 (100%)
 Strand = Plus / Plus

                                                                        
Query: 395  accaccgccacgacgacaacaaccaccacgatccgccttcgctctccggcttcgaagctg 454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503  accaccgccacgacgacaacaaccaccacgatccgccttcgctctccggcttcgaagctg 562

                                                                        
Query: 455  ttctcctcgctctctacgccgccgagaccaaatcccgcaacggcaaacccctcatcgcca 514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563  ttctcctcgctctctacgccgccgagaccaaatcccgcaacggcaaacccctcatcgcca 622

                                                                        
Query: 515  ccgtccccgacctctctctcccttccatctaccattcccctctccgtaaaccccaaaact 574
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623  ccgtccccgacctctctctcccttccatctaccattcccctctccgtaaaccccaaaact 682

                                                                        
Query: 575  ccaacgctaacgctccctcctccgtcgctgtgatctcaccaccgcttgaacccctcctcg 634
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683  ccaacgctaacgctccctcctccgtcgctgtgatctcaccaccgcttgaacccctcctcg 742

                                                                        
Query: 635  ccgtgaaatccaccaagcgcgcctccattgtcggcgccgcgttacagtcctacttctccc 694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743  ccgtgaaatccaccaagcgcgcctccattgtcggcgccgcgttacagtcctacttctccc 802

                                                                        
Query: 695  agatctctcatatgccctcctggtccaagctcgaattctgccgcttcctcgccggatggg 754
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803  agatctctcatatgccctcctggtccaagctcgaattctgccgcttcctcgccggatggg 862

                                                                        
Query: 755  ccggccaggactgcccctgccggagagacctcgatcgcgtcccatccaacactttaactc 814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863  ccggccaggactgcccctgccggagagacctcgatcgcgtcccatccaacactttaactc 922

                                                                        
Query: 815  tgacccttgacgacgacggtgacggtggtggtagcaatggcggttgtgaccgtgagattg 874
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  tgacccttgacgacgacggtgacggtggtggtagcaatggcggttgtgaccgtgagattg 982

                                                                        
Query: 875  agattgagagtgttggagaaatgatggggaaggtgcagattcatgattctgatgggttgg 934
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  agattgagagtgttggagaaatgatggggaaggtgcagattcatgattctgatgggttgg 1042

                                                                        
Query: 935  ccaaaggggataggatccctttgccttgggagattctgcaaccggcgttgaggatcttgg 994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 ccaaaggggataggatccctttgccttgggagattctgcaaccggcgttgaggatcttgg 1102

                                                                        
Query: 995  ggcactgtttgtttgccccattgaaccctcaagaggttaaggatgctgcatcttttgctg 1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 ggcactgtttgtttgccccattgaaccctcaagaggttaaggatgctgcatcttttgctg 1162

                                                                        
Query: 1055 ttaggtgcttgtatgctagggcctctcatgatttggttcctcaggctattcttgccacca 1114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 ttaggtgcttgtatgctagggcctctcatgatttggttcctcaggctattcttgccacca 1222

                                                                        
Query: 1115 ggagtctcattcagcttgataacagggccagggacgccgcgaaagtcgccgctgcagcta 1174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 ggagtctcattcagcttgataacagggccagggacgccgcgaaagtcgccgctgcagcta 1282

                                                                        
Query: 1175 caaatcccaacacccctaccaaagtcaagaaacctgaaatacttttggtctcaaagtgag 1234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 caaatcccaacacccctaccaaagtcaagaaacctgaaatacttttggtctcaaagtgag 1342



 Score =  262 bits (132), Expect = 5e-69
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaattccaccgcaacaactcatctccgtcgtcatcaaactcctcctccatgagcgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atggaattccaccgcaacaactcatctccgtcgtcatcaaactcctcctccatgagcgcc 168

                                                                       
Query: 61  gccggaaccccaaaccctcaaaaaaccgacgacccaatgcactcatggtgggaatccgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gccggaaccccaaaccctcaaaaaaccgacgacccaatgcactcatggtgggaatccgtc 228

                       
Query: 121 tccaaagcccgt 132
           ||||||||||||
Sbjct: 229 tccaaagcccgt 240